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12-1346-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23045285 [Map]; Strand: c
      • AT1G62320.1 - [+] show detail - ERD (early-responsive to dehydration stress) family protein
        Distance: -430; Region: promoter
    Flanking Genome Sequence: 12-1346-1 - 5-prime edge 
    GTATCAACAA AAACGGCACG AAGTTTCTTT TCTTCTCTTC CCCATTTTTG 
    TGCTGTTAAC AGAACCAATC TCTCTGTTTT TTCCATACTC TGTTTTTTCT 
    TCCCTCTCTC TGTTTCTGTT TTCAGAGGAA GGAGAAGAGA AAACTAAAGA 
    AACTTGTGCA ATACTTTTCC TTGAAGAAAA TTTAAAGATT ATATTCGAAG 
    AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23048146 [Map]; Strand: c
      • AT1G62330.1 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 12-1346-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCAAAT 
    TATAAGTTTT CCTGATTTTG TTTTTTTTTA TGTGTGTGGA GTTTANATGG 
    GAAAAATGGA TATCTAATGG TTACTGCAAA TGGTGGGGTC AACCAACANA 
    NAGTTGCTGT AAGTTGCNAT TGCCGTTACA CATTACCTTA GTACGACTTT 
    TTCTTTATCG ACTAACCATT TGGATTTCGC GGGGAAATTA CAAACAGGTT 
    TGTAATATTG TTGTTGTTGC NCGGATGCTA AATGCCACAC TCGTTGTTCC 
    CAAATTCATG TTCAGCGATG TCTGGACCGA TGCAAGGTAA CTATTGTAAG 
    GTCCCTCCGT TCTCTGTCTC CTTCTCTTAT TATTGATGCT TTCTTGAAAA 
    CATCAAATTT TGACACTCTT GATTGGTACG TATATGTTTC ATAGTCAGTT 
    TGGANATATC TATCAGGTGG AACATTTTAT CAAGTATCTC TCTCCTGATA 
    TCCGGATTGT AAANAAACTA CCAAAGGAGC TTCAGTCTCT ANATCTTGAG 
    GCTATTGGCA GCGTCGTGAG TTCCTTATAC AGCTTTTAGT CTAAAAAAAC 
    GATTTCATCT TCGTATTTTT TCTGATGTAC TTCGNGTTTA CGTTTTGTCT 
    TTTAAGGTTA CGGATTTANA TGTCNTGAAA NAANCCCAAC CCCGGGTTTT 
    ATATGAAGCA CATTCTTCCT NTTTCTACTA AAAAANAAAA TCNNCCCTTT 
    NTTAGGATTC GNAAACC

AT1G62320.1

Model type
Protein coding
Short Description
ERD (early-responsive to dehydration stress) family protein
Computational Description
ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT1G11960.1); Has 1443 Blast hits to 1265 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 708; Plants - 430; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62330.1

Model type
Protein coding
Short Description
O-fucosyltransferase family protein
Computational Description
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G11990.1); Has 815 Blast hits to 808 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 815; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR