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12-1354-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 289395 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon2 (3UTR)
      • AT4G00710.1 - [+] show detail - BR-signaling kinase 3
        Distance: -653; Region: promoter
    Flanking Genome Sequence: 12-1354-1 - 5-prime edge 
    GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA ACAAACATGC CATGTATATA ACTCTCTTCT 
    TTGAATCTGT ATCTATCTAT CGATATGCAT CTATATGTGT TGACAACTCA 
    TGCGTTCGTG AACTCGTTCT CCGAATTAAC AATGGTGATC GCAAACAAAC 
    TCTGATGATC AAATCAAATA AATTGCTTCC ACACTCGCAA TGTTGAAACA 
    GAGAATCTAA AAGCTCAAAA CAGAGTCGGT TAGATCCTAA CAAACTCTTT 
    AAACCATCTC CAATTCGCAA CCAAAGCTAA ACCATCGCTT CCACAAAACT 
    AATTGGTCGA TAACCAGCCT AAACCCGGTT TGATTTAAGC TGAACCAGAT 
    CCGTGTGATC AATATATAAA AAAGCCCATG GGCCTTGAAC AAAACAACGT 
    CACATCGGTG ATTAACACTG TTTTTAGTGC TTAATTAGTT CCCTCCCTGA 
    TTACAAAAGT CCGTTAGTGA TTACGGCATG AAGAGACAAC GGGAAAGAGG 
    AAGAAGCATA TCTCTCTCTC TGTCTTGTTC TATGAACGAG ACCACTTGCT 
    TTAACAGGCG GTGCTAATTA TTTTCCAGAA AATAAAAAAC CCCAAAAATC 
    TGTACGACAA ACAATTTATT AATCAACTCT TTTTTTTTCT TTCTATAAGG 
    TTAATGGCCA GATTCTTTCT TTTCTCACAC CCNTTAAAAT TTTTNATCAA 
    CTTGNCGGNA AAATTAATTC TTGGCTTATT CTATCTTTNT TTTCTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 289388 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon2 (3UTR)
      • AT4G00710.1 - [+] show detail - BR-signaling kinase 3
        Distance: -660; Region: promoter
    Flanking Genome Sequence: 12-1354-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    TTACTCTATC CAGAAGAAGA TTCACAGCAT AGAGTCGGTC ATGGCTGGAA 
    GTCGCCGGAA AAAGTTGACG GGAGCGGAGG GAATGCGGTG TCGGAGCTTT 
    GGATGTCGCA TGAAGTAGTA GCCGGATAAG AGAGCGACAA GTTTAAAAGG 
    GGTAATGTAG AGAGCCATGG CAATAATGAA ACAGAACGTC ACGAATATTG 
    CGGTGGCGCG TGGATCACGC CAGCTCAGCA ACGCTTGCAC TCGCTCTCCT 
    TGTGCGGCTA TGTCTCCAGC CACCGACTGT ACCTTCCCGG CCACAGATC

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00710.1

Model type
Protein coding
Short Description
BR-signaling kinase 3
Curator Summary
Encodes BR-signaling kinase 3 (BSK3), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.
Computational Description
BR-signaling kinase 3 (BSK3); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT1G01740.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR