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Mutant Lines
12-1361-1

12-1361-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 350799 [Map]; Strand: c
- AT3G02040.1 - [+] show detail - senescence-related gene 3
  Distance: -789; Region: promoter
- AT3G02050.1 - [+] show detail - K+ uptake transporter 3
  Distance: 0; Region: exon1 (5UTR)

GAGCTAACTT GAGAAGGATT CCGACGGGGA GAGACTCCAG ATTCCGCCGG 
CGCCATCGCA GGTTGTCGAT ACAAAAGAGA TCAATTGAGC GAATCAAGTT 
GGAGCTCTTC AGACGAAACC CATCTTATCT CTCACTCTCC TCTCCTAGCA 
TCAAATATCC ACCTTAATTA ATTAGCAAAT ACTCTCTCAA CGCGGGAACC 
TTTATATCTG TCTCTCTCCT CCACTCACTT GTTTCTCCGA TTAGCAATTT 
TCCTCGAGAA GTGAAGTGAA ACTGACAGTC TTCTAATAAT AATACTCACC 
AGTCACGTTT TCCCGTCCTC GGGTTGGCCC CACCTATGTT GGCTCGTCGT 
CAGGCCCATT ATGGGCTCTC CTAAAAGCCC ATCATACATC TTGTTACTAA 
TATACAGACA CTATATCTTA TCTTAAAAAG TACAAGGCCC ATTTAATCAA 
AGGGCGTGAT AATATGTAGT AGGAGCTGTA AAGCT

3 prime edge [+] show sequence

Chromosome: 3; Position: 350915 [Map]; Strand: c
- AT3G02040.1 - [+] show detail - senescence-related gene 3
  Distance: -905; Region: promoter
- AT3G02050.1 - [+] show detail - K+ uptake transporter 3
  Distance: 0; Region: intron1 (CDS)

GTTAGCTCCT TTATGCCCAC TTGAACTGTT CATAGCATGT TTGGCTTTTG 
CTTTCATTTC TATCTAAATA AAGACCCTTG CTTTCTTGTG CTGGGATTCT 
TCTATTGCTC TGTTTTCAGA CTTACTGAAT TGTTGATATC CGTTTCCTTC 
AGCTCTCGTG GATGAATCTC TCTAGTAACT TGATTTTGGC CTACCAGAGC 
TTTGGTGTAG TCTACGGTGA TCTCAGTACT TCTCCTCTTT ATGTCTTCCC 
TAGCACATTT ATTGGAAAGT TGCACAAGCA TCACAACGAG GATGCCGTAT 
TTGGTGCTTT CTCTTTGATT TTCTGGACCC TCACGCTCAT TCCCCTTCTC 
AAATACCTTC TTGTATTACT GAGTGCCGAT GACAATGGAG AAGGTGCAGT 
AGCAAACGAG ATCCTCCTCT CTTCAACTTA TATCTCCCCG GATGATTGAA 
TCTTTTTCTG TTTTTGCCTC TCTAGGCGGA ACATTTGCTC TCTATTCCCT 
GCTTTGTAGG CATGCTAAGC TACCANNCCG GGCCGNNNAC CACNCGGCCC 
CTNTAA

AT3G02040.1

Model type: Protein coding
Short Description: senescence-related gene 3
Computational Description: senescence-related gene 3 (SRG3); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G41080.1); Has 1727 Blast hits to 1696 proteins in 532 species: Archae - 28; Bacteria - 1003; Metazoa - 245; Fungi - 173; Plants - 101; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G02050.1

Model type: Protein coding
Short Description: K+ uptake transporter 3
Curator Summary: potassium transporter KUP3p (KUP3)
Computational Description: K+ uptake transporter 3 (KUP3); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, response to external stimulus; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT4G23640.1); Has 3477 Blast hits to 3392 proteins in 1029 species: Archae - 13; Bacteria - 2401; Metazoa - 1; Fungi - 102; Plants - 838; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink).
Link: InterPro Scan - TAIR