1. Home
  2. Mutant Lines
  3. 12-1374-1

12-1374-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 54170 [Map]; Strand: c
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -721; Region: promoter
    Flanking Genome Sequence: 12-1374-1 - 5-prime edge 
    CCAATAACAC GTTTCACACC ATTCGCATTG CGCTCTCTCC TTCCTTGATA 
    TGATCATATA GAACGAAAGG TGGAAACTTT CTTATTTTGT ATGGATCGTA 
    TACGCAATAT GGTTGGACAA AACTAATCTG TTTCAAACAA AATACATGAA 
    ATATCCCACA AGAAACAAAG CAAACTATAA AAAAAATAAT GCGGTAAACA 
    CGGAAAATAT CACATATACG AATCCTTTTT CGGATGTGTT TTCAATCCTT 
    TGAATTAAAT ATGTCCACAC TCGATATGTA AAAACAACTT GACCCATCAC 
    AATTATGATC ATAAAATACC AACGTACTGT TAGCCTAATG ATAAATCTCC 
    CAAGCAGAGG TGTTTANATC GAGTTATGTT GTAAGGGATT TTTTCTCCAA 
    AGGANATAAA TTTAATTTGA TGTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 54234 [Map]; Strand: c
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -785; Region: promoter
    Flanking Genome Sequence: 12-1374-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGGTTATTGG TAAGATAATG CATGGCCTAC ACCCACTTTC TCTTTTTTTT 
    TTTNTNAATT AATTNATTTN GCCGCCAGTA TAGTTGGATN TGTNTATNTN 
    TATAAAAGTN CCCNTAAAAA AATTTNGGGG GGANGGAAAN CCCGNGTNGT 
    NAANAACCNG NCTNGCCTNG TAAATANATA ANGGAAAAAA AAGGGCCAAA 
    ANAAAAACCC CAAAANACTA AANATAAAAC CAAAAAAACC TTGTACCNGN 
    TTTTNANGGN CATNANTNNG GCCTNTGTNT NNAAATNCAN AAATNTNTAN 
    CGTANTNNGG ANCTAAATAA TAAAAGTNGG NAAGNGTNTN TGTCCGNNTN 
    TCCANCTNAA CCANTNTAAN GGCTTCCNTA NANANGGAAA NAANCNTGNG 
    TANAGTTNGA NNATCTANCN TTAANAANGG ATNCCCCNGT TCCAAATNTN 
    GANAAACTNN ANNAAAGTTN GTTTNTNGAA ATAAATANNC TNCCTAAAAA 
    AATAANNGAA GCCCTTNTAA AGGNAAAGGT NGNGGACCAA ATNTGGGGGG 
    NAAGNTACNA A

AT4G00140.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR