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12-1421-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seedling (PO:0008037)
  • albino value (PATO:0000968)
    (Seedling::albino)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11718409 [Map]; Strand: c
      • AT1G32450.1 - [+] show detail - nitrate transporter 1.5
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 12-1421-1 - 5-prime edge 
    GTTATCAGAA ACTAGGAAAG TGACAATAGA ACCAACATTA ATAACTAGAA 
    TTAACTTCGA ATTTTACGTG AACGTGTCAA GACATATCCA TGTGTTCGAA 
    CGTACGCTGC ATGTTTTGGT AGAAAAACCC CAACCACATG ACAAATGCAT 
    ATAATTTTTT GTTGTATAAC GGACGCATCA TTAATGAATT TCCAGACTTA 
    TCTAGTAAAT TTCCCATAAA TTCTTGCTAT TTTTTATTTA TTAATTATAG 
    GGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11718525 [Map]; Strand: c
      • AT1G32450.1 - [+] show detail - nitrate transporter 1.5
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 12-1421-1 - 3-prime edge 
    CTGATAACTT ATTACCTCAA AGATAAGTAT GCATATCAAT CAATCTACAC 
    ACTTTTAGAT ATACATCATA TCGGTATCTA GTTTTTTTCC CTTGTCAGTT 
    CAATTCATAC GTTTTTTTGT CGGGATATAT ATCTCAATTT ATACGCTACA 
    CATAATTTTA TATACAAAAT AATGTAAACA TGTGTGTAGA AATATACAAA 
    TCATGTATTA AGCCATACTA ATGATTTGAA TCCATGAATT ATATAGGGAC 
    CGGCACTGAA TATACCTTAT GCAAAGATGC TATGAGTTTG CATGTGGTAT 
    CTTTGAGAAA AGGACGTGAA GAACAAAATA AAATAAAATA AAAGATTCTA 
    TGTTTTAAGG TGTCGATCAT ATATTTTCCT CCACTTTGGT TTATATTCTA 
    NAGTTGATTT CTTAGCAAAA CTATATATTT ATTTCAATTN GATATATAGT 
    TAAATTGTAA TTTTGATTAG GGAAGAGAGA CATACGAAGA ATGACGATGC 
    CAGCAACCCA TTGGCCTGAG TTAGAACGAA TAGAGGGACG ACCATAGTAA 
    TCCACTGTCC CATCTCTTGT TTCTTCTTCT CCTTCTTTCT TCTTNATCGN 
    CTGCATTTTC ATTTTAGTTA AATTTAATTA ACTGATACAC ACACATCAAT 
    TTATCCTATA AATATATAGA AAGATGCTTT ATATGCCTAA TTTCNTACTA 
    GTCTCTACAA CCTTTTGGGG CT

AT1G32450.1

Model type
Protein coding
Short Description
nitrate transporter 1.5
Curator Summary
Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.
Computational Description
nitrate transporter 1.5 (NRT1.5); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: NITRATE TRANSPORTER 1.8 (TAIR:AT4G21680.1); Has 7755 Blast hits to 7381 proteins in 1434 species: Archae - 0; Bacteria - 3851; Metazoa - 707; Fungi - 433; Plants - 2214; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink).
Link
InterPro Scan - TAIR