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12-1473-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22663138 [Map]; Strand: c
      • AT1G61420.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-1473-1 - 5-prime edge 
    ATTGTCATAG ACAATTTTTC GGGAAGAACT CTATGGCAAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22663251 [Map]; Strand: c
      • AT1G61420.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-1473-1 - 3-prime edge 
    NTGAGACCCG GATCGNGCGG TGTCANCAAN GCTGNGCNCT GAGACCCGCN 
    TGAAACAAGA GCTNCTCCNG TGGACCATGC AACGCCGTGT TTGCCATTAA 
    ATAACAGAAG ACTTCCATTG TTGCTGATAG CGAGATTTGC CGTGGAATCT 
    GTAACAGGCT TTTCTCTATT GGCCACCCAC ACAACCACCC GGGGAATAAT 
    ACCCTTGAAC CAGATTCCGA CATACTGATT CTGGGAGTTA TTAAAATTGA 
    AGAACCCCAG TTCATAAAAA CCATTAGAGG AGCTGAGAGT TTGTCCTATT 
    GGCAAAGGAC TTTCTTTCGT TATCCCTGCA GAGCTAGAAC TTATAAAGAA 
    GCTAGATAAG AGCAAATAAG CAAAGAACAC GATCCACTTC TTCCCCATAT 
    TTGTTATTTC TCTCCAAAAA CTATCTTTTT TAGATTAGCT TTACATAAAG 
    CGAGAAAGCA AGAAAAAAAA AAAAAAACNT TTTTTGCNAC NTTTNNNTTT 
    TTTGCNACCC NNGGGNNNGN NCTTNGGNAA ATNNTCCCNA AAANAGAAAA 
    TNNGNGGGTT TGTTANAANT NNTTTANAAN NGGGGNNCAA AAAATTGNGG 
    GNNTTTTNGN NNANNTNAAA AAAAAANNGG NNCANANCCN GANAATAGCC 
    TNNCCCNANT NAAANCCCCC NGGGGTTNTN GTTACNTNGT NNANAANAAN 
    AAAANAAAAA AACTTTGGGN TTTGTAAANN TNTTNATAAN

AT1G61420.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 124891 Blast hits to 122927 proteins in 4589 species: Archae - 114; Bacteria - 13852; Metazoa - 46086; Fungi - 10635; Plants - 35417; Viruses - 454; Other Eukaryotes - 18333 (source: NCBI BLink).
Link
InterPro Scan - TAIR