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12-1482-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 841666 [Map]; Strand: w
      • AT4G01930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -906; Region: promoter
      • AT4G01935.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 12-1482-1 - 5-prime edge 
    TATGTAGTAA TCTAGCTTGT TGTGTACTTG TGTATGACAA TTTTGAGGAC 
    AGTGGAAGTG AAACAAAACT CTATATGGTT TTGGTGAATG AAACAGAGCA 
    TTGATGTTCT TCTTAGAGCT AAGTGCTGAA ATGTACAAAG CTGGAGTTTC 
    AGACAACATA GAAGCT

AT4G01930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01910.1); Has 2022 Blast hits to 728 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 2; Plants - 1926; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01935.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR