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12-1535-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18425443 [Map]; Strand: c
      • AT4G39700.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 537; Region: intergenic
      • AT4G39710.1 - [+] show detail - FK506-binding protein 16-2
        Distance: 1596; Region: intergenic
    Flanking Genome Sequence: 12-1535-1 - 3-prime edge 
    ATAACATACA CGGGTCATGT AATCTTTCTA TACATACAAC TACCCCCACC 
    ATACTATATT TTAAAGGACT TATTCAACAA TTTTTACTGA TATGATTCTT 
    GCTCTTCAGT CTTCAGGTGT AAACAAAGTA AGAGCATCCT CAACAATAAG 
    CTCTTATTAA AAACCTCTTA ACAACAATAA CAATGATTAT TTTATTATAA 
    TATTATTATA TAAATAAATT TTAAGTTTAA GAAAAAAATG AACCAATGTA 
    TAAGTGACAT GTGGCTTAGG TGGTTTACTT GATTATTAAA AACCTCTCTT 
    CATTCTCTTA TCTAAGAGCT CCTCTTCATT TTTTCTCTTC TTCTTTCCAT 
    GTTTTTATTT TTATATTACT AGATGAATT

AT4G39700.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G39710.1

Model type
Protein coding
Short Description
FK506-binding protein 16-2
Computational Description
FK506-binding protein 16-2 (FKBP16-2); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR