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12-1579-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 122480 [Map]; Strand: c
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -634; Region: promoter
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -796; Region: promoter
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -796; Region: promoter
    Flanking Genome Sequence: 12-1579-1 - 5-prime edge
    ACTCTATTAA TATGCATCAC TTGGTATTTT ATGGAGTTTC GTGCTAGAGC 
    AACATCATCT AAGAAATAAA AAATGAATGA TACTACTGTA GTAGTAATAT
    ATTGACAAGA TAGATTAATA GAAAAGGACA AACACTTGTA AATGTTACCT
    ACATTGACAC CTTGACAGAT CAATCAAAGG ACCCCAATAT ATTACTTTTC
    GGAATAAAAC AACAATCATG ACAAAAGGTA TTAAAAGATG TAACTATTTG
    AATAAAGATA TCTGCATTTG TAACATTTTG TATATAGGAG AGATTACAGA
    GACAAGTTGT TTTTTACGAG CTATTAGCTT TATCGGAATA GTGCAAAACT
    GTTAGAAGAA ACTGTATTAA AAAAGCTCTA CAAAAAAGCT AAAAGTAAAA
    CCTTTTGTAA CATTTTTGAT AAAGTTTTTA TGATTGATTC AAAACTGTAT
    AAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 122596 [Map]; Strand: c
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -750; Region: promoter
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -680; Region: promoter
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -680; Region: promoter
    Flanking Genome Sequence: 12-1579-1 - 3-prime edge
    AATAGAGTGT AGCAAGTGTA GTAACAAGTA GTAACGAGTG TAGTTTCAAA 
    TGAGCATTGA ACAAACTAGT TGACGATTGG GAGAGAGCAA ACATAACAGT
    GGAGTTTACT AGAGAAGAAA GGTGCCACAA GATACCACCA CGCTCTTCCT
    GCTTTCTTTA TTCCTCGAGT CTGCTTTTAC AGTACTAGTA CTACCTCTTT
    TATATCTTAC TTTACCATAT AAATCACAGC TCATCTTTCT TATTTTACTT
    AGAATAGTAG CTTGACATGT TTTTTCGCAA GAAGAAGATT CATATAATAA
    ACGATTATAA ATGTGGTTTA GATTTAGCTA AAGCCTTAAA AGGGTAAAAG
    GAGAGGACAT GTGTACAAAC ATTAGTCCGG CCCTTATTGT CGTTATGGTG
    ATACGATAAA ATTGTCGATA AGTAGACTTG GTGAAGTGTG ATGTCTCCTA
    GTTTCTTAGG ATAGAGAGCC CCAAAAAAAC CTAAACCTAA ACCCAGAGAG
    AGTGTGCCAG AGTGGGCCTA TTTTCTCCTC ACGGACTAAC GGCGACGACT
    CCGAGGCTAC ATACTAGTAA ATCAAACAAC TTGGGTTTTA GTGCAATATA
    AAATTATTTT GGGCATAAAT TGTAATTACG GAAACTATTG GGCATAAATT
    GTAATTATGG AAACGTTTGG GCATGAATTG NTATTACGGA AACTGTTGGG
    GATAAATTGA ATTACGGAAC TTG

AT2G01210.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR