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12-1606-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24235791 [Map]; Strand: c
      • AT1G65250.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (3UTR)
      • AT1G65260.1 - [+] show detail - plastid transcriptionally active 4
        Distance: -467; Region: promoter
    Flanking Genome Sequence: 12-1606-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCACGCAT CCATCAAAAT CCAAACACAC ATACACAAAC 
    TAAGGGACAA TATAATGAAT CAAAAGTAAC GTAGCACTAT TTCTAAATAC 
    AACAACAAAA ATGAAACTTG ATAATGTTTT AATACAATCA CNGAATCGAA 
    GTTATTTTCA GCACATTGTT CGATTTTTTT CCTGAAAAAA CGAAACCAGC 
    TCAACATAAC CCATTGAAAC ATTTTTTCNA TGAAATACCT GGCAGGCAAT 
    ACTTGGTAGC AGTGCCTTTG TGTGTTTTAA GTCTAATTTG AGAGGACCAC 
    TGTGGAAGAA ATGTCTTGGG GCAGAGTCCG AGTTTGGGGT TTTGACCCTG 
    NAAGGAAAAA AGGNGNAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24235844 [Map]; Strand: c
      • AT1G65260.1 - [+] show detail - plastid transcriptionally active 4
        Distance: -414; Region: promoter
    Flanking Genome Sequence: 12-1606-1 - 3-prime edge 
    GATGCGTCTG TGTTTGTTAA TTCAAGAGAT ATCTACTCGT GTATTATAAG 
    GGAAAGTCTC CCAAGTCAAT AACAATTCTA AAGTTTACAT TGTGAGTTGG 
    GAAACATGGT TCATTGACGT AAGTTTGCAA ATTCCAGCAA CTACATCTGA 
    CTATCAATAT TGAACTGTCA ACTCCATGAT TGTTTGGTGG ATTTGGACAT 
    TCACATCTAT ACTAAAGTGA AACATTCATG ACGGTAAACT TCTCTTGGAG 
    CTGTATCTTG CATATTAAGA ATCAAAGAAT ATCAGTGAAT TTTGCTCTTC 
    ATTGTCAGCT TTGTCTTTTC AAGAGTTCTG ATCTTCAGCT TTGAGTAATT 
    TCCGTTTTCA ATTCCAATAA AATATGTTTT ATGAAAAAAT CAATGTTATT 
    CATCGACCAA AACGACGTAG GATAGAGAAA GAAAAATGGG AACAACATCC 
    GAGTAGCCTC CGAGACCACA AACATCCTCC AATAAGCCAA AAGAAGACGA 
    GAGAAGGAGA AGAGTCGAAA TCGCCATTGA AATGGCTCTC AAAGCT

AT1G65250.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65190.1); Has 23233 Blast hits to 22999 proteins in 991 species: Archae - 0; Bacteria - 1242; Metazoa - 1932; Fungi - 104; Plants - 19241; Viruses - 13; Other Eukaryotes - 701 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G65260.1

Model type
Protein coding
Short Description
plastid transcriptionally active 4
Curator Summary
Encodes a protein required for thylakoid membrane formation.
Computational Description
plastid transcriptionally active 4 (PTAC4); INVOLVED IN: vesicle organization, thylakoid membrane organization; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PspA/IM30 (InterPro:IPR007157); Has 3123 Blast hits to 3108 proteins in 1139 species: Archae - 38; Bacteria - 2412; Metazoa - 160; Fungi - 68; Plants - 89; Viruses - 95; Other Eukaryotes - 261 (source: NCBI BLink).
Link
InterPro Scan - TAIR