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Mutant Lines
12-1612-1

12-1612-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 24906403 [Map]; Strand: c
- AT1G66760.2 - [+] show detail - MATE efflux family protein
  Distance: 1960; Region: intergenic
- AT1G66770.1 - [+] show detail - Nodulin MtN3 family protein
  Distance: 48; Region: intergenic

GGGATAAAAC TAAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
TTCTTTATTA TATAATCATC TAGGATTTTT TTTATATTTT TAGGACTGTA 
ATATGCGAAT AAGTCAAATT TCGTTGTCCA TAGTTCTCAG AAGCCGTAGA 
CTCTTTTAAA AATATGACCT TCTCTCTTTG GTCATTTTTT TTNGTTNGAG 
GACCATTTCT TCAANAGNGA AAATNGANAA AAAGTCGTNG ANGTTTCTNG 
AACAANCTCN CTAAAAANGC ANCTAANGTT ANCCCATAGT TNGTNCTTAT 
TCTTCAATTA ATCAANGAGN CATTTATCCA AAATTTATCA NCAAGAATT

3 prime edge [+] show sequence

Chromosome: 1; Position: 22664938 [Map]; Strand: w
- AT1G61420.1 - [+] show detail - S-locus lectin protein kinase family protein
  Distance: -975; Region: promoter
- AT1G61430.1 - [+] show detail - S-locus lectin protein kinase family protein
  Distance: 0; Region: exon8 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GAGAAGTTAA TTTTTTGGAC CAAGCTCTTG CTGATTCTAG TCACCCATCT 
GAAGTTGGAA GGTGTGTACA GATTGGTTTG CTCTGTGTTC AACACGAGCC 
TGCAGACAGA CCAAACACAC TTGAGTTGCT GTCTATGCTT ACCACAACAT 
CAGATCTTCC TCTGCCCAAA AAACCCACAT TTGTAGTGCA CACTAGAAAA 
GACGAATCAC CGTCAAATGA TTCGATGATC ACTGTCAATG AGATGACAGA 
GTCTGTGATC CAAGGACGTT GAAACTGTAG AATTGGAATT ATTCTCTATA 
AGGATCAAAA TTTCTAATGG TTGTAAAATT ACATCCCTTC CTTTATTATT 
CAGAAACTTT TTATCTATGT GGAAACTGTT TGGTAAAATT GACTAAGGTA 
TATTTTATTA GGCATGATTA CATGATTCCA CTTCCCACTA AATTGACAAA 
ATACTTTGCT CAAAAACAAA TCGTTGACTC TACTTTATTT TAAGACTTCC 
CGGGAGATTA TTCTCGGGCC TAGTGGCACA CCAATGTTGA CTGTTGAATT

AT1G61420.1

Model type: Protein coding
Short Description: S-locus lectin protein kinase family protein
Computational Description: S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 124891 Blast hits to 122927 proteins in 4589 species: Archae - 114; Bacteria - 13852; Metazoa - 46086; Fungi - 10635; Plants - 35417; Viruses - 454; Other Eukaryotes - 18333 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G61430.1

Model type: Protein coding
Short Description: S-locus lectin protein kinase family protein
Computational Description: S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61440.1); Has 120876 Blast hits to 119144 proteins in 4455 species: Archae - 106; Bacteria - 13737; Metazoa - 44590; Fungi - 9940; Plants - 34648; Viruses - 406; Other Eukaryotes - 17449 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G66760.2

Model type: Protein coding
Short Description: MATE efflux family protein
Computational Description: MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to wounding; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G66780.1); Has 11176 Blast hits to 10988 proteins in 2036 species: Archae - 239; Bacteria - 8105; Metazoa - 148; Fungi - 328; Plants - 1324; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G66770.1

Model type: Protein coding
Short Description: Nodulin MtN3 family protein
Computational Description: Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT4G10850.1); Has 928 Blast hits to 913 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 0; Plants - 632; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
Link: InterPro Scan - TAIR