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12-1618-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 111879 [Map]; Strand: w
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -3268; Region: intergenic
      • AT2G01190.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: -3096; Region: intergenic
    Flanking Genome Sequence: 12-1618-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC AATGTTGGTG CATAAATAAA AAGGGTAGTA AAGTGCAAAA 
    GACTAGAAAT GTGGGGGAGT AGTGCAAAAG ATTAAGAGTA GGGGTTTATC 
    GATGATTAAC TTGTTCGTTA GGTGTAATTA TCATTAGACT TTGCAAAATG 
    CAAACNTGTA ACGAATGCTT GCATGAGCGC CGTCTGGAGC TTTGACGCGA 
    GTCTTACCCA CGACCCTTTC TTTGACTCTC CAACAGAGGT CGAATCCAAT 
    GCAAACCACT AGCTTCTTCA TGTCTGTGGC AATTTCTTTG GTTGAAACCA 
    TTAATGTCAT CTTATGTTAT TCAATTTGTA AATATTATGA TTTATGAAGG 
    TGTTAGGCAG AGGGTGAATA TTAAGAACAC CTTCAATGGG GATTTCTAAA 
    CAAATAATAA AAAAATTATA TGATTTAAAT ATTACATGAG TCTCTTAAAT 
    TTGATGAAAC CTAAGCCAAT TGTTTCTTAA CTAAAAGATA ATTAGTCTTG 
    GTTTCACCAA ATTTAAGAGA CCCATAATTA AAAATATTAT TTATCTATAT 
    TTACATTTTA ATTTTGTTTA ANAAGGGTTT TTAGGTAGTT CTTATGCNTN 
    TGAANGTNNA ATAGGANGAT ANANAATAAA AAAAACTCTT AGGCTAANTT 
    TTCTTTAAAT TTAAAAANNC CTTCNTTAAA AATNATGATT ATNTATNCTT 
    ANNCTNNAAT TNTTNNAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 111810 [Map]; Strand: w
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -3199; Region: intergenic
      • AT2G01190.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: -3165; Region: intergenic
    Flanking Genome Sequence: 12-1618-1 - 3-prime edge 
    GCGNNACCCG GCCGNNNGNA TCANCANGNC GNNCNNNNNA CCACGNCGTT 
    TNTTTAANAA CTNTAATAAN TACTANGATG ATAATGANCN TNGTCACAGA 
    GGTGAGCNTT GTGGATAAAG TTTTTNAATA NTTGAAAACA ANTAANTCNG 
    NNNTATGAAA TATAGATNNA TATTATTGAA ATCAANGAAG GTGGGTTGGA 
    GGGTGGGTGT ANGTTGATTA ATNAAGAAAT AANTCTTNCA GGGGCAAAAC 
    NAATCTTGCN AGTAATACAA AAACTTTAAC TATATAAGTC AGAGCTATTT 
    NCANTGCGNA ACTTTATAAT GTTTCTCTAT TTNTAGAANA ANTATANCTG 
    GATTTTGCNT TCANGTNTAN TTTAANGTAA ANTNAANTTA TTTTATTAGA 
    ATATANNAGT AAAGANANGT AGGANNTTGT NTTTCGTTTT ANNNNTANTG 
    AAGNAATAGN AATTNTTATT ATTTTCNTNA NCGTTTGNNT NGGNNGNGNG 
    NNNTNNNNNN CACNTATNNA NAATNTGNNA GNNGAATTNN TANNNCNNTT 
    TANAGGNANN NNNCNNCCCG NANANTNNCN CTNNNNTNTT AATNGGTAAT 
    NNATNTGNTN AAAGNCNGTT TTCNCATANN NCNNTTNNTA NGNGAGGNGN 
    AGTNNNNNGT TNNCNNNAAN TATNNNNTNG NTNAANAATN TNCAGNTNTN 
    ANANANTGNN TTACTATNNN TANTNNGTNA GAGCNTANTN NCACTGNGCN 
    AATATNNNGC TNGGCTNGGT AAAAGTNTGT GNGNTNNTGN ATT

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01190.1

Model type
Protein coding
Short Description
Octicosapeptide/Phox/Bem1p family protein
Computational Description
Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink).
Link
InterPro Scan - TAIR