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12-1640-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3737630 [Map]; Strand: w
      • AT1G11160.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: 12-1640-1 - 5-prime edge 
    ACAACAATAG AACAGAACAA TAATGCAGTG CAGGAAGATC CGCGTAAGAC 
    ATCAAGACAG ACAGGTGAAA CTCCTGTCAT ATCAACACGA CGAGCTAGGA 
    GTACTCCAGC CAGAGTGATG CCTATTGTTC TCAATCGGGA TAGTAACGTG 
    ACATCTGATG AGCCTCCTTT AACACAACCA GCTAGGACTT CTTCATTTCC 
    AGTGATGCCT GTGATACTCA ATCAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3737514 [Map]; Strand: w
      • AT1G11160.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: 12-1640-1 - 3-prime edge 
    ATTGTTGTAC TGGCTCCTTC AGTATGAGTA GTTTTTTCTC CTCTCTCAAA 
    CTTCTCAACT AAGGAGCGTG TCCTCCCCGA GACAACATTT ACTGTAAACA 
    TATCAATTTA TAAGGAAACT GTAGCCAGCC AACTTAAATG CTAAGAAGAA 
    AAAACAGAAA CAGCAAAAGT TTTAAATTCC TAACCTCCTT CAACAATCTT 
    CACAGGGTTC AATTCTCTGC TGCCGCTAGG GTACTCAGTG TCTACAGAAC 
    AGAAATTTTA TACCGGTCAA TTACTAATTG ATCATTGTCT CAAAACCAAG 
    TACGTGAACC ACAGACTACG GATGATGAAG AATT

AT1G11160.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR