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12-1687-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22666036 [Map]; Strand: c
      • AT1G61430.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-1687-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATNNN 
    NCCATCCTAC TTTAGCTCAT ATATCAAACG ATGCATGGAG GAATTTTCTG 
    CAATCACAAG ACGTCCCAGG TTTAGAATTT TTTGAGATGA ATGCCATACA 
    AACTGCCACC AATAATTTCA GTCTATCAAA CAAACTCGGT CCTGGTGGAT 
    TTGGTTCTGT TTACAAGGCG AGAAACGTTT TATCCTCTTT GCTCTTTTTC 
    TTTTCTGTCA TTTCTTGACA TGACATTTGC AACTTGTTTC AGGGAAAACT 
    GCAAGATGGA AGAGAAATTG CGGTAAAACG TCTTTCTAGC AGCTCTGGGC 
    AGGGCAAACA GGAGTTCATG AATGAAATAG TACTGATATC AAAACTCCAA 
    CACAGAAACT TAGTCCGGGT TTTGGGATGC TGCGTCGAAG GAACAGAGAA 
    GCTATTGATT TATGGGTTCT TGAAAAACAA AAGCCTGGAT ACTTTTGTCT 
    TTGGTGGGTC ACTTCTTACC CCTTTCGTGT AGTTTTCCCC TTTATATCTG 
    GAATTTCTTA TCTGATAGCT TGTATACTTA GATGCAAGAA AAAAGCTCGA 
    ACTTGATTGG CCAAAGAGAT TTGAGATCAT TGAAGGTATT GCACCGTGGA 
    CTTCTCTATC TCCACCGTGA CTCACGCCTC AGAGTAATTC ACCCGAGACC 
    TGAAGGTCAG CAACATTCTT CTGGGATGAG AAATGAACCC GAAAATNTCA 
    GATTTTGGTT GGCTCGNATG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22666103 [Map]; Strand: c
      • AT1G61430.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 12-1687-1 - 3-prime edge 
    ACCGTTAGAA TATGTGTGTC AGTGCCAAGT GAGTATATTC AGAGTTTTTA 
    AAACAGGCCG AAACCAATGT ACCAGAAAAA TAATATACAA GTCAGTCAAT 
    TTAGTAGTGG AAAAAACACC TTTTTATTTA ACGGATATCT TATAACAAAT 
    GTAACANAGC AATTTTATTG ACAACCAAAT GATTAGATGA ACAGTGAGAG 
    ATTGTTCGAT AGTAAAGTCA TCAATGTGTT ACCATTATGT TCCACTCTGC 
    ATCTCCAGAA ACCAAATGCA GCAAATCCAA AGATCACGAA TAGGGTCAGG 
    CTCACTGTAC TAGCAACAAT GGTCATCTTG CGCTTATTTA CATCTGAGGA 
    ATTTAGGATA AGAATTGAAC AATAAGTCAT GCTTCTATGG AAAACATCAA 
    TATCAAAGAA GTGGAAGATA TAATTACAAA AGATACAAAA GGTCCTTGAA 
    TTATATTGTA AGTCATACCT AGCTCANAAC GTGCAAGACG AATGGAAAGA 
    AGTTCTCCTG CTGCAGAAAA TTGCCTTGTG TCCATTAGAT C

AT1G61430.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61440.1); Has 120876 Blast hits to 119144 proteins in 4455 species: Archae - 106; Bacteria - 13737; Metazoa - 44590; Fungi - 9940; Plants - 34648; Viruses - 406; Other Eukaryotes - 17449 (source: NCBI BLink).
Link
InterPro Scan - TAIR