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Mutant Lines
12-1699-1

12-1699-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 29940589 [Map]; Strand: c
  - AT1G79570.1 - [+] show detail - Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
    Distance: -1733; Region: intergenic
  - AT1G79580.2 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
    Distance: 261; Region: intergenic
Flanking Genome Sequence: 12-1699-1 - 5-prime edge
```
CATAGAATAA TGTGGTGGAC GATAGAAAAA GAAATACTTT TGATTAAAAA 
GATAGAAGAA GAATCACACA CTTTAAAGTA GAAGAAGAAG CAACTAGTAT 
AACTTTGGTT TCATAATTAA AGCCCAATTG AAAGAAAATG AAATTTCGTT 
TTTTCTATTG AATCTTTTTG TCTTAAAATA AAGAAATATA ACCGACTCCA 
ACGGCTTTAT TGTAATCTCT CTATACAACA TGGATC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 29940660 [Map]; Strand: c
- AT1G79570.1 - [+] show detail - Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
  Distance: -1804; Region: intergenic
- AT1G79580.2 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
  Distance: 190; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTCT 
ATGGCATCTT CTAGGCATGA ATATTTATTT TCACTTATTC GAAATCCAGA 
TTAATTATGT TCGCTTCAGA TCGGTTTATC TGAATTGAAC ACTAGTTTGT 
GAGATTTTGC TGAACAAAAA TTATATTCTG AAGTGCAAAA TGATGGTGGA 
AACGAAATTG AACCTTCAAG CACCTTTGTG ATGATGAGGT ATTAGTCTTC 
GGAGAAACAG AACAGAATAT CGTAAATGTA AGACAGAATT ATAAAAAACA 
AAAAAACAAA CAGATTCCTC GAACTGTGAG TTGGTTGCTG TGTCAAGTTC 
GCACAGCTAA AAAAGAGAGA GAATAAAATC GAAAAACATG AGATTCAACA 
AATCCGATTG ATCTACTTTG GGAACTTGAG AAGATTAGCG TCGTTTCCCA 
AGTAGTGAAA CGGAAACCTT TGATTAACTG GAGATGAAGA AGAACCACCA 
TTGTTGTTAC CCAAATGATC AGCCTGATCG TTATTATCGT TGTTACTCAA 
GTCACCAAAA CATTTTGCTT GATGGTTCTG CACTTGCTGC TGCTGTTGCT 
GATTCATGTT GCCTGTAGTG AGAAGCT

AT1G79570.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
Computational Description: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 118967 Blast hits to 117429 proteins in 4809 species: Archae - 112; Bacteria - 12197; Metazoa - 45923; Fungi - 10276; Plants - 32353; Viruses - 463; Other Eukaryotes - 17643 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G79580.2

Model type: Protein coding
Short Description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curator Summary: NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions.
Computational Description: SOMBRERO (SMB); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 70 (TAIR:AT4G10350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR