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12-1711-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16297245 [Map]; Strand: w
      • AT5G40720.1 - [+] show detail - Domain of unknown function (DUF23)
        Distance: -653; Region: promoter
    Flanking Genome Sequence: 12-1711-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    TCCACTTATC CCCTTTTTTT TCTTCACGTC ATCTCTAACG TCTATCCCAC 
    GTTGTCGTTT TGGTTCTTCC AAAGATATCT GTTTTGTAAT TTGGCCCAAA 
    AGGCCTTTCA TCAAACGGCC CAATTGATAA AATGATCGAG ATAATCATGG 
    TTGATCAAGA CTCAAAAGTC TAAACCAAAT AATTAAGAAT GATACTAACA 
    AATATGAAAA ATGAAATTAA GTTGAACCTT TGAAATGTTT TANAAATGTT 
    AAATGCGATT GTACCGCTCT AGTTGCAGTA AACACTATTG AATT

AT5G40720.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF23)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR