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Mutant Lines
12-1723-1

12-1723-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 320691 [Map]; Strand: c
- AT2G01720.1 - [+] show detail - Ribophorin I
  Distance: -427; Region: promoter
- AT2G01730.1 - [+] show detail - cleavage and polyadenylation specificity factor 73 kDa subunit-II
  Distance: 0; Region: intron1 (CDS)

ATCGTCACTA CCACACAGCT CTTTCCAATC TCTTGTCCAG CACCTGGATA 
CAACACAAAA AAGATAGAAT TATACAGAAA TTGAAATTGT GAAACTTTGA 
AGAAGCAAAG AGAGAAGAAG AAGAAGAACA AAAACTGTTA CCAAGTACGA 
GACAATCGAT AGCCATAGTT ACTGAAGAAA TAAACAACAA TTTGAGTTTC 
AAAACTCGTC GATGGTCAAA AATATCTTAC TCGTTGAATC AGAACACAAA 
TTCAAGTGAC CGGAGAAAAT TTTGAAGGGG GCGAGAGAAG AAACAGAGTT 
AGGTCGACAA ACGAATTTGA ATGGCGGCAA AGTGTTCAGT GACATCGGAA 
CCGTTCGGAG TTATTACACG TGTCTGATCC AACCGTCGAT ATTTTTGTGG 
TGTGAAGCCC AATAATAGTT CTTCTCACGG CCCATTAAAT TTAAAAGTTT 
GAAACGACAA CGTCTCATGT CGTTTTTAAT CTGAGGAAGA AAAAAGCTCG 
TAACTAATCC CTAAATCAAG AGAGAAGTGA GAGACACTGA GACTTTGTAG 
TTGACCGGAT CATTCTCACT TCGCCGGCCG ACGTTCTTCC TTCCGCCGTC 
GGTATCTATA TTTACGATCC ACGATCTCTC TTGCTGTTTC TGTCTTCATC 
GGNGAGTAAT TTTTTACTGA TCTTCCAAAT CCTATCAATT

3 prime edge [+] show sequence

Chromosome: 2; Position: 320807 [Map]; Strand: c
- AT2G01720.1 - [+] show detail - Ribophorin I
  Distance: -543; Region: promoter
- AT2G01730.1 - [+] show detail - cleavage and polyadenylation specificity factor 73 kDa subunit-II
  Distance: 0; Region: exon2 (CDS)

GTGACGATTA ATGGTAAAAA GATAATGTTC GATTGTGGGA TGCATATGGG 
CTGTGATGAT CACAATCGTT ACCCAAATTT TTCTCTCATA TCTAAATCCG 
GTGATTTTGA CAACGCGATC TCTTGTATCA TCATCACACA CNTTGTATTG 
ATTCTTCAAA CCCAGAATTT GTCCCTTTTT TAAAATTCAC TTTTTTAGTT 
TTTGTGGGTT TTAATTGTGA GTGTTAATAG CCATATGGAT CATGTTGGAG 
CGCTTCCTTA CTTCACGGAA GTTTGTGGGT ACAATGGTCC GATTTATATG 
TCGGTGAGTT ATATTGTCCT CAAGGTGTTC GATGAAATGT TTGACTGACT 
GTTTTTTTTT TGNNAAGGTA AAGGNNGTTN ACTTTGATTN GNCTNTTTTG 
TAGTATCCCA CAAAGGCTTT GTCTCCATTA ATGCTTGAGG ACTNCCNAAA 
AGTGATGGNG GATAAAAAAG GCAAGGAGGA NCTTTTCNCC ACTACCCATN 
TCGCAAACTG CNTGAAAAAA GGTNCTTGAA TATNGGATTT ANTTCATTTG 
AGGTCTTTGN GCACAAATTA CCANCCCGGG CCGNNACCAC NCGGNCCCTT 
ATAA

AT2G01720.1

Model type: Protein coding
Short Description: Ribophorin I
Computational Description: Ribophorin I; FUNCTIONS IN: oligosaccharyl transferase activity, dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin I (InterPro:IPR007676); BEST Arabidopsis thaliana protein match is: Ribophorin I (TAIR:AT1G76400.1); Has 386 Blast hits to 386 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 127; Plants - 63; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01730.1

Model type: Protein coding
Short Description: cleavage and polyadenylation specificity factor 73 kDa subunit-II
Curator Summary: a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo
Computational Description: cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink).
Link: InterPro Scan - TAIR