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12-1765-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage
Phenotype
seedling (PO:0008037)
  • wrinkled (PATO:0001810)
    (Seedling::rumpled leaves)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8077037 [Map]; Strand: w
      • AT5G23940.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-1765-1 - 3-prime edge
    GCGGCGGGGC TACTAGCAGC GCACGGACCG GAGTTCGGAG CTTCGGTGAT 
    CCAGAAAGCA ATCGCGGCAC ACGACGCGAG TGTGATCGAC GCACGTAACG
    ACGAGTGGGA GAAATCGCCG AAGATTTTTC AATTCAAAGA CGCCGGAGTG
    AATTGTGTTG CGGTGGGAAG CTCACCGAGG TTTCGTGTTT ACGAGGTGGA
    TTTCGGGTTT GGAAAACCGG AAACGGTTAG GAGCGGGTCG AATAACCGGT
    TTAATGGGAT GATGTATTTG TACCAAGGTA AAGCAGGAGG CATAAGTATT
    GATGTGGAGA TAACTCTTGA AGCT

AT5G23940.1

Model type
Protein coding
Short Description
HXXXD-type acyl-transferase family protein
Curator Summary
Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer.
Computational Description
PERMEABLE LEAVES3 (PEL3); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: epidermis morphogenesis, localization, trichome morphogenesis, cutin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR