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12-1789-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 341059 [Map]; Strand: w
      • AT5G01881.1 - [+] show detail - unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bac...
        Distance: 793; Region: intergenic
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 484; Region: intergenic
    Flanking Genome Sequence: 12-1789-1 - 5-prime edge 
    ATAAACTAAC AAAATCGGTT ATTTGATAAC GGTCGGTACG GGATTTTCCC 
    ATCCTACTTT CATCCCGTAT GTGTGTGGGA CACTCCATAA CTATACAATA 
    ATGAAAGCAT TACAGAAAAA GCTCATGCTT GGACCCTTTG TGACTTTCAC 
    TTCACAATGG TGGACTTCTC TTTTTCGCTT TATGGAAAAG AACAATCAAA 
    AAGCCTCTGA GTAATGATTA TTTTGAAACA TAAATTAAAA TTTGTGACAG 
    TGCGAGACTC TGAGTAATGC TTAGTGCGCT TGACTGACTT TATGCCATTT 
    CAAATTTTTG TACAGAATCA TATTGTTTTC TATTTTGCAT CATGCTTACT 
    AAACAGAGAT TCAAATAACA CGTCCAAAAT AGCAAACCGA GAAACCTTAA 
    CACAAAGGCT GCATTGTAGT TATATGTATA ATTGGGAGTT CTTTGACCAA 
    CAATCTTTTT AGTGTAACAG AAGTTGATCT TTTGGATCTA CTTTATGAAC 
    CAACCTTCAA CATTGTGAAA CCTAGTGTGA AGATTCACAA CTTAACAACA 
    TTGTGAACTC ACGAGAAAAA CTTCTTTATA GAAAAGACGA ACACTATATT 
    ATGATAATAT GAAAATTGAA CAAGGAATGA AGAAATACAA ACAAGGAGGA 
    TTGATTCATC TGTAGTTGAC TAATCACTCT AAGTCATGAG AGGGACATTG 
    TATGAGCTCT AATATCTTCA CCACTTCCTC CATCTCCGGC CTATTCGACG 
    GCACTTGGGA CCCACACACC AACCCTAGTT

AT5G01881.1

Model type
Protein coding
Computational Description
unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01890.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Computational Description
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR