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12-1855-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8915455 [Map]; Strand: w
      • AT5G25610.1 - [+] show detail - BURP domain-containing protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-1855-1 - 3-prime edge 
    GAAGAAGACC ATTGAGGAGT GTGAAGCCAG AAAAGTTAGT GGAGAGGAGA 
    AGTATTGTGC GACGTCTTTG GAGTCGATGG TCGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8915571 [Map]; Strand: w
      • AT5G25610.1 - [+] show detail - BURP domain-containing protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-1855-1 - 5-prime edge 
    TCTTCTTCAT CATCTCCGCT TCTTCCGAAC CAGCTTCCAC CGAGAAACGT 
    TTNAACGTCT CCGAAAACTT CTNCGATCCA AAAGGCACCG TTTCAGCCTC 
    TCCACGTGGC AAGAACGCAG TTTTGCCTCC GTAACCATCC TCAGCGTTAA 
    ACCGGACATT CATTTCTTTC CCGCGAACCA AGTCCTTCTC CAAGAAGAAG 
    AGAGCCGCGT TAGGATCGTC GTGCTAGCTG AGTCTCCTTC GCTGCATAGT 
    TATACACGAA AGGGTTTGCT CCTGGTTTCA CACCAACGTA AATCGGTCTT 
    CCCTTGTGGC GCGTGTGCAC CGTCACACCG CCTTTACCGA CTCCTACGTC 
    GGTTCTTTTA CCGGGTTTAC CCGTGTGGAC TGCGACGCCA CCTCCGTGAC 
    CTTTTCCGCT GCCAACGCTC ACGTGTGTCC CTCCTCCGGG CTTGCCCTTG 
    CCTGTGTCCA CGCGTACACC TCCCTTTCCA ACGTTCACGG CGGTTCCGCT 
    ACCGGTTTTA CCTTTATGGG TGTTAACGTT TACTCCGCCT TTACCTACTT 
    GGACGTTGGT ACTTTTCTCG TCGGTAAAAT CTGCAAAAAA AAAAAAGNTT 
    NGGGGAAGGA ANATTTTTTT TTNTTANANA TTAAAAAANA ANCATTNTNT 
    TTNNNANNTN AAANNTTCNN AAANAATATT TNANAATTTN AANAAAAATN 
    GGTTTTATAC NNGTCAAACC

AT5G25610.1

Model type
Protein coding
Short Description
BURP domain-containing protein
Curator Summary
responsive to dehydration 22 (RD22) mediated by ABA
Computational Description
RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR