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12-1954-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24662782 [Map]; Strand: c
      • AT1G66200.3 - [+] show detail - glutamine synthase clone F11
        Distance: -5099; Region: intergenic
      • AT1G66210.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: 2847; Region: intergenic
    Flanking Genome Sequence: 12-1954-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTCGATCTAA TATCAAGAAA CCTACATATC ATCAATTATA TATGTTTGAG 
    GAAATCTAAA AGCATATAAA TATTTTAAGT TGTGAAAATT AGATGTCCTA 
    CAAAACTTAA ATGCTAAAGT GAGAAATGCG GAGAAGGGAA ACCGGAGATA 
    TGATCGTAAA TGTCATATTC TTTTTTCGCA AGTTTATTTA AAAAATTTGG 
    TACCAATTTC CGAATT

AT1G66200.3

Model type
Protein coding
Short Description
glutamine synthase clone F11
Curator Summary
encodes a cytosolic glutamate synthetase, this enzyme has low affinity with substrate ammonium
Computational Description
glutamine synthase clone F11 (GSR2); CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone R1 (TAIR:AT5G37600.1).
Link
InterPro Scan - TAIR

AT1G66210.1

Model type
Protein coding
Short Description
Subtilisin-like serine endopeptidase family protein
Computational Description
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT1G66220.1); Has 8523 Blast hits to 7657 proteins in 1261 species: Archae - 243; Bacteria - 5042; Metazoa - 227; Fungi - 284; Plants - 1974; Viruses - 0; Other Eukaryotes - 753 (source: NCBI BLink).
Link
InterPro Scan - TAIR