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12-1959-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19299361 [Map]; Strand: w
      • AT1G51940.1 - [+] show detail - protein kinase family protein / peptidoglycan-binding LysM domain-containing ...
        Distance: -243; Region: promoter
    Flanking Genome Sequence: 12-1959-1 - 3-prime edge 
    CTTAANNGNC GAGGTATTTT ACCGACCGTT CCGACCGTTT TCATCCCACA 
    TAAGTATTAG GTATTAAACC AAACACATAA CCTAATTGAC TCCTAAATGT 
    CTAATTAATT CACAAAAATT CCTTCATATA ATAATATTAA TTTTGGATTA 
    TTATGATTTT CAATTTTTGA CAAAGAACAT GGTCTTTTGG ATATTAAAAA 
    TATATATTTT GGACATTTCC TCTTATCAAT TAAGATTTTA TTTTAGATTT 
    TTTCAGTCCG ACAAGAGAGT GTGCGCTTCA CTCCTTCCTC CCATGGCTGA 
    TTTCATCTCT TCTCTACTTC TTCCTCTTCT CCATTAACCA AATCAACCAA 
    TACCCATTTC TCAATTCACC ATATCTTCAT CAAATCAAGA TTCTTTCTTC 
    CTTAATCCCA AAAAAAAACC TTCTTTCAAT TCTGATTTTC ACTTAGGTTT 
    TTCTCAATTN TCTACTTCAC ACAATGAATC TTACCTTCTA CATCTTCTTC 
    TTAAGTCTTT TACCAAGTTT CTCATCTTCA AAGCCAATGA ATTGCTCTGA 
    CACTACTCGT CTCTGCAGTT CCTTCCTTGC TTNCAAACCA AACCAAAACC 
    AATCTTTCTN TGTAATCCAA AGCNTGTTNC GANGTATTAC CACANGACAT 
    AACTCGCCGA CANNNCCGGA GGGNACTTCT TTATTAAAAA AGAACTGNTC 
    TTGGNCTTAC TACGACTCAT TAAATNCCCN NCAAACACNA CATTCACAAT 
    CGAGACAAAA CGGTNGGANA CGNTAACAAA TGGTN

AT1G51940.1

Model type
Protein coding
Short Description
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
Computational Description
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: chitin elicitor receptor kinase 1 (TAIR:AT3G21630.1); Has 117626 Blast hits to 116415 proteins in 4493 species: Archae - 110; Bacteria - 13527; Metazoa - 43649; Fungi - 10139; Plants - 32288; Viruses - 471; Other Eukaryotes - 17442 (source: NCBI BLink).
Link
InterPro Scan - TAIR