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12-2241-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9024457 [Map]; Strand: w
      • AT5G25880.1 - [+] show detail - NADP-malic enzyme 3
        Distance: -92; Region: promoter
    Flanking Genome Sequence: 12-2241-1 - 5-prime edge
    NTTGGAGACC ATANGTCATT GNCTCCGCCT ACAAAATCGG CGATTATTAA 
    TCACATTGTC TTCTTCTATG NTTGATCCAC CTTTAATNTC TTCATAAACA
    TNATNNTTCC NCTNAAAGNT ANNAACCNGG GGGGGNGGAN GACGCGTGNC
    CTNTNGNAGN TNNGAATTAA GGGAGGGGGG GTGAAAAAGA ANNGGGGCCG
    CNNAAGNTGG GGGGGCNTTT NNAGGGGGGG GGGTGNTAAA ANGNNNAGCG
    CGNGNGGANA GNAGNNGGGN GGATAGNGGN GGNNGGNNAA NNNANANGNN
    AGGAGGNGGA NGGNNGGAGG CNAGTGNGNN AGTNNGNNNN AGNCNANGNN
    GGCGGGGCGG NGGNANANNA GAGNNGNGNG GGNAGNGAGN GNGGNGGGGA
    AGNGGGAGGG GGGGGNNGGG AGNCANGNGN GNGAGGNNNN AGNACGGGCG
    AGGNGCACGG GNGGNGGGGA CGGACGTGNG AGACAGNGNG GGCNGGAGCG
    NNAGGTAGAG GACNGGNNAG GGGNGANNAC GANGGGAGNA NNGGNGCGTN
    NTGGGGACNG GGNNCNNGCG NGTGNCCGGG NNNGNTGNAN GCCGGGGCNN
    NAANGCGNNG GGNNGGGGNA GGGAGNAGGN NAGAGGTGNC NGTANGTNAA
    CGANGNACGN GCNNANCGGC GAACNGGTAN GNNGGAGAGN NAAGGGGAGC
    GCCGGCGNNG AGAANAAANN GNANNGNNAG GNACGNGGNG AGAGGNNAGG
    GGTGCNGGNA G

AT5G25880.1

Model type
Protein coding
Short Description
NADP-malic enzyme 3
Curator Summary
The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.
Computational Description
NADP-malic enzyme 3 (NADP-ME3); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: N-terminal protein myristoylation, malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 2 (TAIR:AT5G11670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR