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12-2347-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30364099 [Map]; Strand: c
      • AT1G80800.1 - [+] show detail - pseudogene, 40S ribosomal protein S12 (RPS12B), similar to ribosomal protein ...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 12-2347-1 - 3-prime edge 
    ATCATAACAT CAATTTGCTT ACCTTGGTGA ATGGGCCGGT GTAAGTCTTG 
    TGTTTTCTCT GCATATAGCT TGTTTAGTTT GTCATGTGAT GCTCTTTGTT 
    GGGGTTTCGC CTTGAAACTT AGATGCNTTG TAAAATGACC AATGTATGTG 
    GTGACAGCTC TGCAAGATCG ATTCAGAAGG CAATGCTAGG AAAGTGGTTG 
    GATGTTCTTG TGTTGTAATT AAGGTAAAGA GAGACTCCCT TATACTCAAA 
    AGCTACATAA CTTGATATAG ACTCTTGTTC TGTGTCTCGT CATCACACTT 
    GTGGGTTTCT ATGATTGAAT GAATGCTTTT GCTTGTCTTA GGATTACGGA 
    GAGGGAACAA CATCGTGAAG AAGCATCTTG AATCTCACTA AATGCAAGAG 
    AAAGCATTTC AATGCCAAAT GCAAGAAGAA TAGAGATTAT GTGCTTTGTT 
    TCCCCTTGTT GGAGGATTGC TGGCGGAATT TGTTTGGATC

AT1G80800.1

Model type
Pseudogene
Computational Description
pseudogene, 40S ribosomal protein S12 (RPS12B), similar to ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum vulgare); blastp match of 65% identity and 4.7e-12 P-value to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S ribosomal protein S12 {Oryza sativa (japonica cultivar-group)}
Link
InterPro Scan - TAIR