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Mutant Lines
12-2363-1

12-2363-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 19115269 [Map]; Strand: w
- AT1G51538.1 - [+] show detail - Aminotransferase-like, plant mobile domain family protein
  Distance: 0; Region: exon1 (CDS)
- AT1G51540.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: -292; Region: promoter

GGTTGAGAAG AGTTNGACAA TGATTAGAAA ATGGAAAACC AGAGGCAACC 
AGACCAATCA TAGAGTTTCT GCTTAAGTAT TAACAAATTG TGTCTTAACT 
ATTAATGATC AGAAATTTTT CAAGAGGATC TCTTAAGGAA ACAAACACAA 
CAATGTCACA ATTAGTAATC TATGTGGAGA ACTTATCAGA CACAAGGCTT 
ATTATGTATT GTTGCGTAGA GAAATGTGTT TGAATCGGTC AATTTTGGTT 
TATTATATGT GTTGGTTTGG TTTGGTTTGG GTGGACCACT TAATTTATGG 
TTTGGTTCGA TTTAATTAAT TTGGTTTTTA TTGGTTTCTC TGACGGGGAA 
GCAGTNTCTC GGANATCAAN AACTGACATT GTTNTGTGCT TGAATTNNCA 
NCCCGGGCCG GNGANCNCNC GTGCNCCC

3 prime edge [+] show sequence

Chromosome: 1; Position: 20007756 [Map]; Strand: c
- AT1G53600.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 4340; Region: intergenic
- AT1G53610.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: 1240; Region: intergenic

ATGAAAACGG TAGAGGTAGT TAGAGCGATC GAGTTTGTCC TAATTCAGAC 
AGAGAATGTT TTTGGGATTA AAAAATTTTT AAATCATGAT CATTTGCTAA 
ATTAGGTCTG TAATTGTTTT TGAAATAATG ATATTAAATA TATTCATAGA 
TTACATACAA TTATACAAAT AAGAATTAGG ATAATGGTTT CCACAAAGAG 
AGTAGAGTTT AATGATGCAT TCCATAAAGA TACACAAAGG TTGTTGTTGG 
TGACATCAGA CGCCGTCGTC ATAGCCGAAG GGGTGGCAAC TGGTTCTTAT 
CTTGCCGCCA TCTTTCTTAG TTTTGTTGTA GAGAAAGTGG ATTAGCCAAA 
TGATTAAGAT TAGCAAGAAA ACTGCCATAA AGACTATAAA CATAATCATT 
TTCCCCATCG ATGATCGATC TATTAGTTTT TCTCTCTTCT TTTAATTAAT 
TCATACTAAA TATGATTTGA TTCTCATACA GGGAAACATG AAGATGTATA 
TATAGATATA GATATAGATA TAGATATAGG TAAACAGATG ATATGCTACT 
TGTGTTAATT TATACTAAAT TGTTGTTTGA CTTTTGTATT TCAATTATAA 
GTACATATTC ATGGAAACAT CCAAAGTTGC ACATATTGTA ACTAACACTC 
CATATTCTAC AATAATCTCA TAATTATATA TATGGTTNGT TTAGCTTATC 
TTGAAAGGAT AGTAATAATA ATAATTTCAT CATCCNCAAT ATTATTTTTG 
AATNTCTACC NANCNCC

AT1G51538.1

Model type: Protein coding
Short Description: Aminotransferase-like, plant mobile domain family protein
Computational Description: Aminotransferase-like, plant mobile domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G50830.1); Has 1047 Blast hits to 1018 proteins in 89 species: Archae - 0; Bacteria - 9; Metazoa - 109; Fungi - 28; Plants - 745; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G51540.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G53600.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 77136 Blast hits to 22764 proteins in 1112 species: Archae - 15; Bacteria - 7068; Metazoa - 10011; Fungi - 1260; Plants - 54670; Viruses - 665; Other Eukaryotes - 3447 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G53610.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53620.1); Has 14 Blast hits to 14 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR