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12-2414-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 15082352 [Map]; Strand: w
      • AT1G40103.1 - [+] show detail - transposable element gene
        Distance: -996; Region: promoter
      • AT1G40104.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-2414-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TCACTAACCA 
    ACCTTCTTCT TACTTAACAA AGCTTTCATG GTGTCGCCAA AGTCCATATG 
    AGTCTTTGGC TTTGTGTCTT CTAACAAGGA TACAATTCTT ACACCTTTAA 
    GATC

AT1G40103.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein, similar to hypothetical proteins from (Arabidopsis thaliana)
Link
InterPro Scan - TAIR

AT1G40104.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G08986.1); Has 88 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 17; Metazoa - 9; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR