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12-2451-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6277009 [Map]; Strand: w
      • AT4G10040.1 - [+] show detail - cytochrome c-2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-2451-1 - 5-prime edge 
    CCTGTGTATC TCTCACGCCA CCTCTATTTT TCTTCTGCCT CCTCGAACCT 
    TCTTTTTCTC ATTTCTCATA AAAAAGGTCA TTTCAAAAAA AAATCAGAAA 
    CCGTCAAAAA GCCACCGTTG ATATTTCTTC CTTGTTGCTT CTTCAATGGC 
    GTCGTTCGAC GAAGCACCTC CCGGAAACCC CAAAGCCGGT GAAAAGATCT 
    TCAGAACCAA GTGCGCTCAG TGTCACACCG TCGAGAAAGG TGCCGGTCAC 
    AAACAAGGTC TGTTCCTCTG ATTCTCTCTT ANATCCACAA TATTCTGTAT 
    CATCATCGTT TGATTTTATT TGGTTACGCT TTGTTCGAAT CTGGATCTAC 
    CACATGCGTT TCGTTTTCTC GTATTGATCT TCGTTTGTGT TTGTTTAGGA 
    TC

AT4G10040.1

Model type
Protein coding
Short Description
cytochrome c-2
Curator Summary
Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.
Computational Description
cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink).
Link
InterPro Scan - TAIR