1. Home
  2. Mutant Lines
  3. 12-2494-1

12-2494-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 128191 [Map]; Strand: w
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 1725; Region: intergenic
      • AT2G01240.1 - [+] show detail - Reticulon family protein
        Distance: 249; Region: intergenic
    Flanking Genome Sequence: 12-2494-1 - 3-prime edge 
    GNNAGGACAA GNTGAAGAAG ANTATCTNTA GANNTNCAGA NCTATACGNN 
    GGAGGGAGAC TAGTCNTGAC AACCCTGACA NTAATAACAC ACTAGAGATT 
    GCTCTACAAT ACACCGTANA TTGATATTTT TGTGAGAAAG TTAAAAAAAT 
    TATTTTAATT AATATTATTN ATATATAAAT AACATAATAA AAAGTATATC 
    ACGGACATAT ATTTTTATCA ACAAAAATTA AAATTTNGTT TTAAAGATGA 
    TCTATAGTTA TATGCTATNA TTTTTTTCTA TGTATGATAC AACTTGGAAT 
    AATTTTTATA ACTAAAAAAT TTGAAGTTTT AATTTATTTT TGNTTNGCTA 
    ATATTGTAAT TTTTGTTTAG NTTTTAAAAT TGTATAATTA TATTTTGATT 
    GNTNATCTNT AGGATTCCGC CCATAGNATA NCATCTGGTA TTANTATCGA 
    CTCAAACATG TCCCACCATA TAACCCCATA TCTTGAAATT AAANATTATT 
    TTTTATTTTC TTATAAAGTA ATATTTGNAA CTTAAAAAAT AAGTTTTNAT 
    NATCNNANCC AAACTTNATA AATTTTATTT TTGATTGTTN TATCTAAGAT 
    TNNATTTTGN ANAATACCNG TCTTATATTA ANNTNTNNGT TAAGGATNNT 
    TAANATTAAA ANNCCTATAT AAAGGNCANT ATNAANNATC NNCNTAAAAN 
    TNAANNTGCN TAAANTNGTT NAATAAAGAC NAACCTTNAA AANNNNNNAA 
    ATTNTNAATG NTNAATAAAA NTNAAANNT

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01240.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 375 Blast hits to 375 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR