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12-2534-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12498471 [Map]; Strand: w
      • AT4G24050.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 12-2534-1 - 5-prime edge 
    AGTAGGATTG GTGTTCTTGA GAGGTGAATA AAAACTTGTC GAGGAATTTA 
    CTTTTTACCA AAGCAAAAAG CTGCGTAGTT GTTAATGTTT TGATTGATGA 
    GTGACAGTAA CCTCGATAGG AGGGTAATAA ATGGGAAAAG AGAAGTAAAA 
    AGGTTTTGAC TTTTGACCTT TGGAAAATGT AATAAATCTT TCTTTTTGGT 
    TTTGATCGAT TAGTCAATTC GATGCGACAC GTGCGTATGC TCTCTCGAAG 
    CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12498355 [Map]; Strand: w
      • AT4G24050.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 12-2534-1 - 3-prime edge 
    ATCCTACTCT CTCATTTATA GTTCTAGGCT TCTAGCTATT AGGTTGATAT 
    AAGGATTGTA GATGGTACAT TATTTACACT TCTGCTTTGG AGTTTTGATG 
    TATAGATAAC AATTAAGTAT GGAATGAAAC ATTTATACCT CATGACTCAA 
    CCAGACCGGG CCANACAACC NACCACTGCG GGTATGTGAA ATGAGTCGGA 
    GATATTCGAT CAAGTCGCCG GAGAACCATC CGTGAATACC GGACGTAACG 
    TTAACGATAC GTCCTTGAAC TCCTGTTTCC TCTGCCGTTT GAATCATCTT 
    GTTTAGCAAA AGATTGGTCA AGAGAAAATG GCCTGATCAT TGTGAATGGA 
    TTAAAAAATT AAGAAGGCTA TTAACAATAA AGTAATACTA GTATATAGGG 
    TAATTAAGAT CTGTCATAGA CTAAGGGAAT CGTATAATTA GGAAAATACT 
    ACTATACCTA GATAATTAGT AGCAAATGTC ATCTCGATCC CGTCTTCAGA 
    TATTGCATGT TCATGTGCTA ACTTGCCTGC GTTGTTTCTG ATTCCACAAT 
    TGCATAAATA ATAAAATAAT CACATAACAT AACAATAATG TTTAAAACAA 
    ATTAATCCGA ATTAAGAACT TAGATTAACA CGTAGTTATG TAAATATACA 
    TGCATATGAT TCTTAGGAAA AAAAGAAGAT TAAAGACTTA CATGANAAGG 
    TTAGAGGAGA TCAAGAGACT CNAAATCGGC GACGAAGTTT CGTACGGAGG 
    CG

AT4G24050.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G64590.1); Has 59308 Blast hits to 59247 proteins in 3068 species: Archae - 448; Bacteria - 39701; Metazoa - 3820; Fungi - 3579; Plants - 1905; Viruses - 0; Other Eukaryotes - 9855 (source: NCBI BLink).
Link
InterPro Scan - TAIR