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12-2543-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19681958 [Map]; Strand: c
      • AT2G48121.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (...
        Distance: 0; Region: intron2 (CDS)
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 12-2543-1 - 3-prime edge 
    GAATATGTAG GACAGAAGAT ACAGGTGAGG ATAACGATCT CTCATCTTAA 
    AAGATCAAAA GAACGGTTCT TTTCTTTCTT TCTTTTTTTT AACCCGATTT 
    TTCGTCTTGG GATCATGCAG GACATAGCAA TGGCTGAACG TTTTGGACGC 
    ACCAGGGAAG TGGTTGCAAG AGAAGCATAG ATGTCTATTA ATGAACAAAT 
    TCTGCGGCCG GTATCTTAGA GAAAAACGTC TTCACAACTT TATAATATAC 
    TCAGAGGAGG TTCATGATCG GTATGAACAT AACCGGAGAC TTAGGAATCC 
    GGCGACAACC GCTGTTCAAC AAGCCATTCA CGGCCTCGCC TACACCATCT 
    ACGGGAAACC CGATGTTCGG CGGCTCATGT TTGAGGTTTT CGACTTCGAA 
    CAAATCCAAC CTAAAGCTGT CTGAAAATCG AAGCTGTCTC TCTCATTTGT 
    CTAATGTCTT TTAGTATACT ACTGGGTTTG ATTTATGTAG TTAAATACTT 
    CATTACCTTT GGTGAAAAGT TGAAAACTTT AAACTAGCAA AATGAGTTTC 
    ATCAGTATAA TCTTAGGTTC ATCAGTTTCA AATTTGTTGC TACCAATTCA 
    AAGAGCTTCT TCTTATGGTT GCATACCTTG AGAAGAGAAA CTGAATGTTG 
    TGAGTAAAGT TTCTTCTTAA GGGATTTTGT AGTTTCCAGG TCTGCAAGTG 
    AGTAAAGCTC CTGGTTAATC CATGTATGAG CTGCATCTCC CCACTTGAGC 
    N

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19681900 [Map]; Strand: c
      • AT2G48121.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (...
        Distance: 0; Region: exon2 (CDS)
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-2543-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCAGC CGCTCAAAAC AAAACCGCGG GTGTTCAAAC 
    TTATGCTTTG AAGGATGCAA GAAGCAGAGC TGTCACTTAA AATCTCATAG 
    TATTGAGGCC CATTAGTGGC TCAACATGGC CCATTTATAC NGGGTTTTTT 
    TTATCTGAGA TCCAGAAATC AGTCGTTTTA CTTGTATCAT CGGAAAATGT 
    TTTTTTAACC TCTACCTTCT TCGGTCAAGC T

AT2G48121.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR