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12-2565-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27530183 [Map]; Strand: w
      • AT1G73210.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: intron1 (CDS)
      • AT1G73210.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 12-2565-1 - 5-prime edge 
    TCTCATCTGA AAACTCACAC CAAATCATTA AACTATTACA AGTTCTAGGT 
    TGTCTGATAC ATCACCCTTG ATTAAAAATA AGACCTTTAG GACAAAATCT 
    GCTGATTAGA GACGAGAGAT TTGTGGGGAG AGACAATCGA TTAAAATAGT 
    TTTTTAAAAT TTGATTAGTT GAGGCTTAAG ACCTTAATTT ACCCCCAAAT 
    TAAGGATTAG TCTAAGAGAA TGAAGAATTA AAAAAAAAAA ANTTCCCTGG 
    GGAAAAAAAA NGGNGGGGGG CTTAGGNGNG NTNCCNAAAA AAANCCNNNC 
    CAAATTCAAN NAACCTTTNT TNNAAAAAAA CCCCCCCCCC NTTNNNNAAA 
    TTNTTNTTNT TTTTNGGNTG GNNNTGGGGC GCCNNAANCN NTNNGNTTGN 
    NNANNTTTNN AANNAANTTN GNGCCCCNAA ANGGGANCNC AANGTNGGNA 
    AATTNAANAN TTCCCAAANT TTTTTAGTTT TNNCAAAAAA NNTTTTTTNG 
    TAAACCCCNT TNCNCAAATT NNCCCCCNTT TTNCCAAAAA AAAAAAAANA 
    ANCNNNNNCC CNAAAAAAAA AAAANNAAAA NANNNNNNNN NGGGGGNNNN 
    NAAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27530067 [Map]; Strand: w
      • AT1G73210.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: intron1 (CDS)
      • AT1G73210.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 12-2565-1 - 3-prime edge 
    AGATGAGATT TGGGCTATAG AGACAATAAT TGCATGGTCC ATCAAGGAGA 
    AAAATTATCT ATGAAATCTA TATCCAATTT AAATGGTGTC ACATCAGTTT 
    ATGGATTCTA TAACACCACG TGGAAACGTG CGACAGAATT GCTTTACTCA 
    ACTATTTTTT ATATTACTAT TATATTCAGT AATCCATTAG CTAAGTACNT 
    GAGTGTTGGT TGAATCTTCT TGGTTGCTTT GGTATATCCT CTGGTTCTGT 
    ATCATTACAA GGTTGTCTTA TTCAGTAATC TTGGTTTATA TCTCTGATTA 
    TGGATTAAGA GCTCAATACA TGTTGGTCTA ATAACCTAAA GATCATGTTG 
    TTGCATTTAC ATTTTGGGGG TAATTAGGAG TTAATGATAG CTAGATTATC 
    AGCTAAACAT TGGCTTTCAG TGTGCTGCTT TGTAGTGTGT TACTTTCAGA 
    GCTTTGTGAG TTGATGATAT TAACAATTTG NGGCAGGAAC AGGGAAAGGA 
    GGAGATTGAG TATTTCAGGC TTGGTGATCT CTGGGATTGT TATGATGANA 
    TGAGTGCGTA TGGCTTTGGC ACACAGGTTG ATTTAAACAA TGGCGAAACC 
    GTTATGCAGT ACTACGTCCC GTACCTATCC GCTTCCAAAT CCCCACTAAC 
    AACCCGCCCT TGCTTTCCAG GTTACNTTTC CNACTTGGAT TCNNGNGACA 
    TTTNANNCTN NNNGGGA

AT1G73210.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G17830.1); Has 263 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G73210.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G17830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR