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12-2589-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
petal (PO:0009032)
  • abnormal (PATO:0000460)
    (Flowers::petal)
fruit (PO:0009001)
  • abnormal (PATO:0000460)
    (Fruits (Siliques)::abnormal shape)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24055934 [Map]; Strand: w
      • AT1G64760.2 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G64760.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-2589-1 - 5-prime edge 
    ATATTGACAC CACCATCGAA GTTATAACGA GTGACATTCT TACGAACCCA 
    ATCTTTGGCT CGGTCGTAAC TAGTCATAAC CTTAAGCTGA TCATTGGGAA 
    TAGCGACCAT CACTTCAAGA CCCGAGCCAG CGAGTGCACC CATGGTTGTC 
    TCGTCCGCAT CAAAAAGCT

AT1G64760.1

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G19440.1); Has 2673 Blast hits to 2603 proteins in 152 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 38; Plants - 2613; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G64760.2

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR