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12-2670-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25236186 [Map]; Strand: w
      • AT5G62880.1 - [+] show detail - RAC-like 10
        Distance: -948; Region: promoter
    Flanking Genome Sequence: 12-2670-1 - 5-prime edge 
    TTCAAAANAN TNNAAAGGAC NAGGGCNANN NNANAATGAA NGNANTATAT 
    CATNTCTAAA NATCCAAGGC ATNAGGGAGA CATGATGGAT NACANNCCCG 
    GGCCGTNNAC CACTCGTGCC CTNTATGCTT TGTGAATATT GAGAATTTTT 
    ATTGCTGGTT GTTGCCAACG AAACTCTTGT TGGCAATTTT AAATATCTTG 
    AGTAAATTAA ATTAGATGAT AAGTTTTTTT AAAAGTAGGT CCACATAAAA 
    AAATCCATAT ATCCTAATAT AATAAATGAA TATCCTAAAC TAAAATTACA 
    ATTTTAGAAT TATCAGTTTT ACACTTGTGA ATTGTGATAT AAGTAATGTT 
    GAAAGGTTGG TCTTAGTGAT TTTGCTATAA ATTTTTGTTG CTATGATATT 
    CTATTATTTT ATATATTTNG TAACCCTAGC TTGTAAGTTA TGCTATATAC 
    ATTATATGAT ATGTAAGTCT CGAGAGAAAA ACAAAAATAG CAAAACATGT 
    ATTCGACAGT ACATGTTAAT GTATACAAAT ATGGTATAGC CATCTTCACT 
    TGTCACTGNG TGGCTCAACG TGACACTATT NTTAACTTGA CGAATATCTA 
    CCTTNTNTTA TAATTNNATT NNNAACNCCA TACTTGNNTG TAANACACAT 
    TATTNNATTT TNTTACAATC CAATACAAGN GTANTAAACN CTTTNNAAAN 
    NAANNNNNNT GGNNCCCCNA ANANNGGGNN AAAAATNCCA NGNAATTNGN

AT5G62880.1

Model type
Protein coding
Short Description
RAC-like 10
Curator Summary
A member of ROP GTPase gene family.
Computational Description
RAC-like 10 (RAC10); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 10 (TAIR:AT3G48040.1); Has 24116 Blast hits to 24088 proteins in 664 species: Archae - 8; Bacteria - 52; Metazoa - 12643; Fungi - 3430; Plants - 2696; Viruses - 20; Other Eukaryotes - 5267 (source: NCBI BLink).
Link
InterPro Scan - TAIR