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Mutant Lines
12-2686-1

12-2686-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 30140368 [Map]; Strand: c
- AT1G80120.1 - [+] show detail - Protein of unknown function (DUF567)
  Distance: 164; Region: intergenic
- AT1G80130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 593; Region: intergenic

GNNATNACGA CNTGCCNNAC ATTCGGNCTC TCCTTCCGNA CCCGGATNTA 
NAAANGCGGN NTGNNNGNAG ACANANNNAN ATANGGAACA CCTTTTAAGG 
GTTTGGNCGC CTTAGATATG NANATNNGCA ACTCGTNCAA GCTAATATAC 
AAGTTGTAAC CTTTTCGNCT AACTCACCAA CAAAAGCAAA ATGAATTAGA 
CACAAAAGTA ATGTTTATCT ACAACTAAAC TCCTTTCGTA AACCCTTTTT 
TTCTTTCAAA TCAAACAGCT GTAACTGAGT AAGAAATTCA AACCAGATTA 
CAACAGCCCA TGGGAATGAC GAGAAATAAT TTGTCCAAAT CGTTTCCTTT 
CAAACCGACA CAAACTCACA ATAATTATTA TTTTTCCACT CGATTTTGTT 
TGCGTCCCAC CAAAAAAGAA GAAAACAAAA ACAAAAAAAG GGTGAAAAAT 
CAAATCAGAN ATCTTCTGCG GAAGGGTGCA CCTGTTCCTC ACCAACCTCA 
AGGAATATCG TCGCCGTAGA TTTGATCAAG CACAAGAACC AATCCCATTG 
CAAAGGCTCC ATCAAAACCG GGCTTCACGT TCAACGAGAA ANCGTCTTTC 
CCAAGCATCA CGTTCGTTGA CGCATCCACT TTGCGCCTTA TCTCCGCCAC 
CTTCCGCCTT GTNTCCGCCT CCACCACCGT GCAGTTCCTT GCCCCCGAAA 
CTACCTTCTA TCAGGTNCTC GCTGCACTGG TAGTCCCCGG NCACCTNCAC 
CGTAACACN

3 prime edge [+] show sequence

Chromosome: 1; Position: 30140483 [Map]; Strand: c
- AT1G80120.1 - [+] show detail - Protein of unknown function (DUF567)
  Distance: 279; Region: intergenic
- AT1G80130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 478; Region: intergenic

GTGATAGCTT AGAAAAATTG TGTCAAATAA GAGTATATGT TATGGGTACA 
AACTACCATA CTTAATAAAT CCTCCTGACT TAGTTACAAT GGAAATTGTC 
GAAAGAAAAA GAAGGAAAAG TTTCATCTTC TTAAAAAGAA ATATTGGACN 
GGAAAGCATG TCGGTGTATG ACCAAACAGT AGTAAATAGT TAAGCAGACA 
GGAAGCCTTG ATTATACGAA TAACAAGTTT TTTTGGTTCA TACGGTGATC 
GTCTTTTGTT CACAAAAAGA AAAAACTTCT TCGTCTCTTA TCTTAGCTGG 
ATCATAACTA ACTATTTAGA TAGACAAAGT TAAAGATCAA ATTCTCCTTG 
CATTTAAGTT GTCCACACCT CTTTTCTAGT ATAATCATTT TCTTGTTTCG 
TGGAATGGTC ACATTGAATT TTAATTTTGG CCCATTAGCC CACTAACATG 
TGGAGGTTAC CAACGAGAAA TCAGATGTTT AGGCCCAAGT ATATAAGAAC 
AAGATATCTT TGACTTTAAC TCCAAACAAA ATCGATCGAT CTGTATCATC 
AATTTCATCA TACTTTTTTT TAACAAACAA ATGCCTAATA TTTTGTCTAT 
CTCGATAGGA CATGGGTAAG TTTCATACTT TATAATACAA AAAGACACAT 
AAATACTGCA AATATAAGTA CATACCCTTA TTATGAAGAC TACAGAACAT 
NTNCAAAGAT TCTGACNTAT ATTATACACN CATATTGCAT TTGAGTATGN 
GTATTAAATA TGCTTCTATA TATG

AT1G80120.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF567)
Computational Description: Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G15810.1); Has 439 Blast hits to 438 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 9; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G80130.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: response to oxidative stress; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G20190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR