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12-2776-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24769797 [Map]; Strand: w
      • AT1G66390.1 - [+] show detail - myb domain protein 90
        Distance: 4256; Region: intergenic
      • AT1G66400.1 - [+] show detail - calmodulin like 23
        Distance: 778; Region: intergenic
    Flanking Genome Sequence: 12-2776-1 - 5-prime edge 
    CTCTTCACCA AAGAGCCTAT TAAGCCAAAA AAGATGCCCT GAAGAAACGT 
    ACGAATTGAA TCTAAAATCC GAGATCACAG ATTGAGAGAT TAGCGAGGCT 
    TCTCTATTTG TTTCCGCGGT TACACNTTAA TTCCTTATAC TTTTGATAAA 
    ATATAGTAAA TCTAAATTGC CACGTGCATT GTTATTTACT AAAGCTGGTT 
    ATTAATTGCA TGTTCTTCAA TATTAATTTC TAGATGTATT TATATTTATC 
    GTTATTAAGT TTGCATACAC ATTTTTGGCG TAAGGTAATC AAATTCTCAA 
    TATGGACCTA AAAGTATTAT ATCAATGAAA GCTCAATAAA TAAACCTGGC 
    TGACTTTTAG AAGTTTTATT TTCTAATCTT AAATCGGAAC ATTAATACAT 
    TGCGTACATG TAGAACATAT TATAGTTGTC AAGTTAGTTA GGAAAGTATC 
    TCTGTCAATA GCTTTTAGAT AGGCAAATAA TCCCTATGAA TAATCAAGAT 
    C

AT1G66390.1

Model type
Protein coding
Short Description
myb domain protein 90
Curator Summary
production of anthocyanin pigment 2 protein (PAP2)
Computational Description
myb domain protein 90 (MYB90); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: production of anthocyanin pigment 1 (TAIR:AT1G56650.1); Has 8778 Blast hits to 8175 proteins in 545 species: Archae - 0; Bacteria - 0; Metazoa - 824; Fungi - 456; Plants - 5872; Viruses - 3; Other Eukaryotes - 1623 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66400.1

Model type
Protein coding
Short Description
calmodulin like 23
Curator Summary
Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering.
Computational Description
calmodulin like 23 (CML23); FUNCTIONS IN: calcium ion binding; INVOLVED IN: regulation of flower development, regulation of nitric oxide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G37770.1); Has 30871 Blast hits to 18969 proteins in 1622 species: Archae - 1; Bacteria - 165; Metazoa - 12615; Fungi - 7465; Plants - 6190; Viruses - 4; Other Eukaryotes - 4431 (source: NCBI BLink).
Link
InterPro Scan - TAIR