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12-2806-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23783548 [Map]; Strand: c
      • AT1G64070.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 99; Region: intergenic
      • AT1G64080.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1473; Region: intergenic
    Flanking Genome Sequence: 12-2806-1 - 3-prime edge 
    NNGNNNANNG ANGNTANATG NTGCNNTNNC CNANNGCTAT NGNGNCCGGN 
    ATTGTNATCG TTANNTGCTG NTCACATTNC NANANGGNNN ANNGNTACCA 
    GTACNNNGTT NGCCNACCGG ATNNACNNTA CTNTNANCGG NGGAGNANGG 
    AGGATACCTT GTGNCNATAC NGTTTNTCNA NGNGATCACN ATNCATGANC 
    CTGNNTTACN ANCGATGCCN NANTNCTGTA TNAAGCAGAT ATATTACCAT 
    GTGTTATGTT NATGNGANCT ANAAAATAAN ANCNTCNTNA NNNATTAACA 
    CNCNTTNANT NGTGAATGAT ATTGACTCCA ATTCCATATN TTGACTCATT 
    CTGTCAATAT GTATGTGCAA CTTTTCCCNG GTTTANTGAC NGGCTTNGNC 
    NATGAANCGG ANTTGNNNTN GNGGNAANGN GNGGNNNNAN T

AT1G64070.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Curator Summary
Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.
Computational Description
RESISTANCE TO LEPTOSPHAERIA MACULANS 1 (RLM1); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: defense response to fungus, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sepal, flower, carpel, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G16870.1); Has 18146 Blast hits to 14776 proteins in 597 species: Archae - 15; Bacteria - 1058; Metazoa - 1168; Fungi - 58; Plants - 15498; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G64080.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52870.1); Has 1546 Blast hits to 738 proteins in 176 species: Archae - 0; Bacteria - 143; Metazoa - 278; Fungi - 131; Plants - 95; Viruses - 4; Other Eukaryotes - 895 (source: NCBI BLink).
Link
InterPro Scan - TAIR