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12-2826-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 793015 [Map]; Strand: w
      • AT2G02790.1 - [+] show detail - IQ-domain 29
        Distance: 2069; Region: intergenic
      • AT2G02800.2 - [+] show detail - protein kinase 2B
        Distance: 2500; Region: intergenic
    Flanking Genome Sequence: 12-2826-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCAGAC 
    ACTACCCACA AATATCGTCA ACGAATGTCC GAGCCGGAGG CGTCCATGGT 
    GGTGAGTACC ATCAACGAAT TTTCTTAACG TTGATTTTCT TTTTTTGTAA 
    CTAAAAAATA TAATAACATT GTTTGGTGGG TGGATGCAGG CAAAACAAAT 
    TCGTAATTTA CGACGTTGCC ATGAACGTGG TCTTGATAGT ATTAAATATT 
    GCAGCTTTCT TGTATATAAG ACATTACAAG CT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 284442 [Map]; Strand: c
      • AT2G01640.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron5 (3UTR)
    Flanking Genome Sequence: 12-2826-1 - 5-prime edge 
    CTTTGNAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTNCNNNC CTGATAACTC ANGNAGANGG GTATTTTCAT 
    ACCGTACTAT ATTCTGAGTG TATTTTCATA CCCAGACAAA TTTGTACCTA 
    AATTTATTTG TTTGCGAACA CCTGGTTTAT AACGTGTCTA AAACGACGTC 
    GTTTATTACT CATCGAAGCA ATGAATCTAG AACATCATCT TTTCTAGATT 
    ACTACTCATC AATCTCAAGC ATGAGACCTG TATCACATAA ATCTGCATAG 
    AGAGATCTCA CAGGCGAGAC TGTGTTCTTA AAGGAAAGCT GTAAACGAGT 
    TTGTTACAGA TCAAAACTTG TGTAATTTGA ACAATAATAA CAATCAAATT 
    TGAAGATTCT TCATTTCCAA AATCATGTTA CTATAACAAA ACAACAAAAA 
    CAAAACATAA GTAAACTTAT AGGACAAGAT CAGAAATCCA TGGAATCAGT 
    CTTTCCTTTT TTCTTATTCC TTTTCTTGCT TCCATTAGTG TTAGTCTTCT 
    TCTTNNGTTT CTCTTCCACC GGTGGCTGTT GACTCAGCAA GTGCTGGAAA 
    TATCGAACCA ACTGGATCAG CTTGAAAAGC TGGATGGNCT NGAACCTTAT 
    TNATNTGTCC CNCTNNTGGC GGNTTTANNC AACNNNCNAA GNNCCAGNCN 
    TTTTCGGANN GNAGANCGGN GGAGCNNCNN CNAAGGAAAC GGGNNACTAC 
    NNGANNTNGG NAGCCCTTTA CAGAANATTT ATNGCTCTGG TGCANGAGNA 
    NNA

AT2G01640.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages.
Link
InterPro Scan - TAIR

AT2G02790.1

Model type
Protein coding
Short Description
IQ-domain 29
Computational Description
IQ-domain 29 (IQD29); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 28 (TAIR:AT1G14380.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02800.2

Model type
Protein coding
Short Description
protein kinase 2B
Curator Summary
Encodes protein kinase APK2b.
Computational Description
protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR