1. Home
  2. Mutant Lines
  3. 12-2831-1

12-2831-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 58030 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -9680; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 675; Region: intergenic
    Flanking Genome Sequence: 12-2831-1 - 5-prime edge 
    ATCAAGCCAA GATAATCCAA TCCNTTNATT TGCTCGGCGA TTTCCCGNCA 
    GGTTCCAATG AACCGGGTGT GACGTGTAAC GTGTTCCCGG ATTTCCCCGG 
    AGATCAGCTT TCCAGGGAGT CTAACCATGG TTCAATCGGA TATCTATTCT 
    GAGAGTTATC ACCGTATTTG TAAAGCCGAT GCTGTCTGTT TCAACACAGA 
    TCCGTCTGAA TAGACCAGTC AACCTCAGGA CCGATTTCCC GATATGTCGC 
    AACGACTCTT GCATCGAATA ATATGTTCAC GGATTGCCCC GGTTGTTAGC 
    TTTCCAGGGA ATCTAACTAG CCTTCGATCC GATATCTCAT CCGAGAATTA 
    TCTCCATGTT TCTGCAGAGG ATGCAATCTC GTTTGACATA GAATCCTTTC 
    TTAAGAAGAC TAGTCATCTT AGGGATCAAT TCCCCCACAA GTCTCAACGA 
    TTCTCGAAAC TAGTAGCACA TCTATGGATT TTCCAGCGAG TCANGTGTCC 
    CTAGAAGCTG ACCCTCACTT CCATCGGAGC TGTCTATCGA ATGTTATCCC 
    TGCTTCTATC CANAAAGATG CGATCTTTAG AACTACNAAT CNGNCTGAAT 
    AAATCCANCT TACACCGGGG GCCGATTTCC CCNACAAANN ACAGGGAATC 
    CCGTAAGGGG TTAATACANN TCCGGATTGG CCCAAANAGT NGTNTTTTTC 
    NGAAAAATTG NACCTCNCCT TACACAAAAT ATAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10379232 [Map]; Strand: w
      • AT5G28463.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -214; Region: promoter
    Flanking Genome Sequence: 12-2831-1 - 3-prime edge 
    GGCTTGATGA GCGTTCACCG AAAACTTGGA TGAGTAATAT GCGAAGAGAG 
    TTGTTTGTGT CCCCCTACCT GGCGCGCCAA TTGTTGATTC TGAAAATCAC 
    ACAATAAATT TGTTTAAAGG GGGTAAACAA ATTTACTTAA CTCTCTCTCG 
    CTATTTAGTG ACCAAAGATT CAATGAAAAG AAGAATAAGG TTGCTTAGAG 
    ACAAAGTTAG GGTTTTGCCC AAGAACAATG AAGAAAACTA GGGGTTTTAG 
    TATTAAATTT CGGATC

AT2G01034.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR

AT2G01037.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 5.0e-229 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR

AT5G28463.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR