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Mutant Lines
12-2910-1

12-2910-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 23074197 [Map]; Strand: w
  - AT1G62370.1 - [+] show detail - RING/U-box superfamily protein
    Distance: 1008; Region: intergenic
  - AT1G62380.1 - [+] show detail - ACC oxidase 2
    Distance: -7973; Region: intergenic
Flanking Genome Sequence: 12-2910-1 - 5-prime edge
```
GCTGTGTGAG ATTATGAATA GATTTATGTG TTATTAGTGG GTTGGTAAGC 
T
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 23074081 [Map]; Strand: w
- AT1G62370.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 892; Region: intergenic
- AT1G62380.1 - [+] show detail - ACC oxidase 2
  Distance: -8089; Region: intergenic

CACACAGCCT AGATTCTACA TATATGCGTG TAATTTCATG TAACGTTGAC 
ATCACAAACT CATGTATGCC TCGGAGATAA CATCAAAGAT TTGACAATTT 
TTTGAACTTT CCATTCCATA ATTTTGTTTG ACTTCAACCA CACNGATTAA 
ATCGTATATG TAACATTCAA AAATTTCGTC GTGTACTAGT CTGATAGTCA 
ATTTCTAAGA TTTCTCAAGT GACTATCATG TATTAGATCA TTCGTGAACA 
AATAATATAT TAAACAACCT CGACATTAGT GGTCCATATT TTCGATCAGG 
CCCAATAACT GATGATGTGC ATAAACAGGC CTACAAGCAT CTCTGCAATT 
TGTAAATTTT AGAAAGAAAA AAGCCCAACA AAGGCATACA AAGTGCCACA 
CGCAACAACG TGAAGCAATG AGTGGCAATA AGGAGTAGAA AGCTAGCGGT 
GCCAGCGATC GACGATCTTC CTTAGCGTTG CAGCCGAGCT CAAATTACAT 
CACCATACAA GCT

AT1G62370.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03965.1); Has 610 Blast hits to 610 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 219; Fungi - 27; Plants - 270; Viruses - 11; Other Eukaryotes - 83 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G62380.1

Model type: Protein coding
Short Description: ACC oxidase 2
Curator Summary: Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.
Computational Description: ACC oxidase 2 (ACO2); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity, copper ion binding; INVOLVED IN: response to salt stress, detection of ethylene stimulus, ethylene biosynthetic process; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8564 Blast hits to 8520 proteins in 992 species: Archae - 0; Bacteria - 1100; Metazoa - 104; Fungi - 1037; Plants - 4951; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink).
Link: InterPro Scan - TAIR