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12-2952-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20846340 [Map]; Strand: c
      • AT1G55750.1 - [+] show detail - BSD domain (BTF2-like transcription factors, Synapse-associated proteins and ...
        Distance: -1158; Region: intergenic
      • AT1G55760.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: 568; Region: intergenic
    Flanking Genome Sequence: 12-2952-1 - 3-prime edge 
    ATGCGTAGGC TCGCATGAAC ACCATCCATT CCATATATCA GATTCGTGCG 
    ACATTCTAGT TTCTGATTAT TTGGCAGTCA CAGAGATTTC CTGATTCGAG 
    TTCGTTTCTA TGTAATTCCC TCTTAGTTTT CCGGCATTGT GGCGGATCTC 
    AGAGGTCTTA GAGTCTGATT TTGTTTCCAT TGAAGACGAT CTGAAATCGC 
    NTTATGTAGC TATTGATTCA GTTTCAGGGA GTTGTTTTCT GATTTTTTTT 
    TTNCCGGAAA TTNGGTTNCN GNAACCCNTG TAGNCCCCCC NTNGGTNTGT 
    ACCCCAAATT CTANNCTTAA AGTAAAAAAA NGTNTNTNTC CCNCNGTTTN 
    NAATTTTCCA NGTNACCTAA AAANCTAGTG GGTNNATNCT NTNAANCTNC 
    NGANCCNTNC CNGTNNAATT NNCTNGNACC ANNANNTGTT TAANCATCNG 
    NCCCCTTTCC ANTAACCTNG GGAAAATTCC NAANCNNGGG NGGATNTGTN 
    NGTTAACCTT TTNACCTGGG NNNANCTTTA GTNNCANNAA NCGGGTAAAA 
    TGGCTAAAAA AGNATGGNAA ATTTTCCTTT AAANGTTAAA AAANCTATTT 
    TAGGGTTANA AATTACCANT CCAAAGTTCA ANCTAANANG CCCACNTTCA 
    TNCAAANCNG GAATTNNCNT GNGGCNGCCT TATCCTTGAA AGGCCAANAC 
    TGGGGTTTGG NGTNAAACCC CCCAANCNTT AANNCTGNCC NNAAAANACC 
    AANAAATNCT TTTGGCCAAA AANCAGGGCC CATAAGTTTT

AT1G55750.1

Model type
Protein coding
Short Description
BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)
Computational Description
BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins); CONTAINS InterPro DOMAIN/s: Kelch related (InterPro:IPR013089), BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) (TAIR:AT3G61420.1); Has 363 Blast hits to 357 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 134; Plants - 65; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G55760.1

Model type
Protein coding
Short Description
BTB/POZ domain-containing protein
Computational Description
BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G21780.2); Has 5280 Blast hits to 5249 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 3933; Fungi - 29; Plants - 1085; Viruses - 19; Other Eukaryotes - 214 (source: NCBI BLink).
Link
InterPro Scan - TAIR