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12-2996-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14422808 [Map]; Strand: w
      • AT2G34150.1 - [+] show detail - SCAR family protein
        Distance: 0; Region: exon2 (5UTR)
      • AT2G34150.2 - [+] show detail - SCAR family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-2996-1 - 3-prime edge 
    TTTGCAGCAG AGATATTCCA TGGAATACAA GAGGAGGTAA TGATAACAGC 
    ATCAAGAAGC AACAAATTGA AGATGAGATT GAAGCAAATA GAAGCTAAAG 
    TTCCTACAAT CCAAAAGACA GTGCTTGCAC AAACAAATCA CATTCATTTT 
    GCATACACNT GGAGGTTTCT TTTGTCTTGT TTCTCTTGTC AATCTTCTTT 
    AATGTCTAGA TTCACATGTT TGTTCTTTAA TCAAAAATTT ATATCCTGTT 
    GAGTTTATTG TAGGCCCTAG CTCACATGCC TTTTGCACTA ACTTCTTAGC 
    TTAAAATACT CTTTTTTGAG TTTAGAATTT GATGATGAAT GATACTAGTA 
    GTCTTTCTTA TGGATCTTAA TTAAAATAAG TCATGATATT TCACTATTTG 
    AGTTCTTTAG AAAATTTAAG TATAGTTAAT GAACATAGTG TTTACATGCT 
    GTTTTAGGTC TGGAGTGGCA TCCTCGTATA CCAAATGTGC AAAATCACTT 
    TATGTATGAC GAATTGCCAC CGTTTATTAT GACTCCATAT GAAGATTGCC 
    GGGAACCTCC GCGGTTACAC TTGCTTGACA AGTATATACA CCTTTTAACT 
    CTCATTTTCT TTTTTGNTAT TACTGGTTCT GCTATGTTTT ANACTGATGA 
    TAATAAATAT GATGCTGATT CTTTGCGGNT TTTGTCANAT TTGATATAAA 
    TGGTCCAGGG TCTTGTTTGA ACNATACTCG GATC

AT2G34150.1

Model type
Protein coding
Short Description
SCAR family protein
Curator Summary
Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.
Computational Description
SCAR family protein; BEST Arabidopsis thaliana protein match is: SCAR family protein (TAIR:AT1G29170.1); Has 2566 Blast hits to 1216 proteins in 219 species: Archae - 0; Bacteria - 1126; Metazoa - 472; Fungi - 223; Plants - 222; Viruses - 2; Other Eukaryotes - 521 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34150.2

Model type
Protein coding
Short Description
SCAR family protein
Curator Summary
Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.
Computational Description
SCAR family protein; BEST Arabidopsis thaliana protein match is: SCAR family protein (TAIR:AT1G29170.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR