1. Home
  2. Mutant Lines
  3. 12-3001-1

12-3001-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24130710 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-3001-1 - 5-prime edge 
    TATAAACNAC AAAATCGGTT ATNCGATAAC GGTCGGTACG GGATTTTCCC 
    ATCCTACTTG GATCATNNGA AACATCATCA GAAACATCAT CAGAACCATC 
    ATCAGAACCA TCTTCAGAAT CCTTTAGGAT CTTTAGGATG ACGGAGACCT 
    TGCATCGAGA GTTACACTGG ATGCAAAATG GCCGAGTGTT GATATTGTTA 
    GGAACCGCCT CAAACTCGAT TTCTTTTTCC CCAAAGGAGT AGATTTGTCC 
    TAGCACGAGA CGTGAGAAAT CTCCTAGTAC GCACTGAGCA TGCAAGGTGA 
    CTCCACAATC ATAACAAGTA TAGAACCATA TACTTGGATC TAATTCCTTC 
    TCACAAATGT CGCACCAATA TTTACCGGTC GCCTCTTCCT TCTCACCACA 
    ACATAAAGTG AGAGGGTGCC CATCGTTCCT ATGCCAAATC TTTTCTGGTA 
    AAGTAGCACA ATACAAACAC AAATCAAAGT CACAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24130725 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-3001-1 - 3-prime edge 
    CTTAAAACGG NAGAGGTATT TTACTGACCG TTACCGACCG TTTTCATCAG 
    TTCTAATGAT GTTTCTGATG NTNCTTCTGA TGATGATTCT GATGTTGTTT 
    CTGATGTNGT TTCTGATGAT GCTTCTAATG ACTGATTCTG ATGATACGNC 
    GGATGATCAC AATGGGTATA TCTGCTCCCG ATCATGTTTA TCGGANTTAT 
    TNGGGTGAAG AAATTTGAAC TTACGTNNNG ATGATAATGA NTGGTTCTAT 
    CTNGCTTGTN TTATTTCATT AGCGTTCNTA TTTCNCTTTT TATTTCCAAG 
    AACTGATATG TANTACATAG NGATTTTTGT TTTCTAATGG TNCAATGCTG 
    GNTATTATAT ATTATGCACC ANTACTGAAA AAGTCACAGA TGCACAGATG 
    TGATCAAACC GGCATATANG AGCATCAAAA CGAATCATAA AACCAATGAA 
    GAACCTAAAG TAAATCAATG AAATTACTAC GAGATCATTC CCTTCGTTAT 
    AGAAGTCTNT TGTATNTGCT TGTGTATAAN TCAATGAAAA ACAAAAGAAA 
    GGTAGTAGNC TAAACTACCA TTGAAGAAAT CTTGCTNACA CAAACACAAT 
    GTTATTTGAG AGCATGCATG ATCACTNAAC TTTTCTTTTC NTTCAAACAT 
    ACCAATTTTG TTGCAAATAC TTGAGANCAA TACTCATGTT TCTCATNCAC 
    CNGGGATGNG TACTNCACTC TAAAAAGCAC AGTAAATATC CAANGGANTA 
    GGCCTTTNAN GTNCNGACAN CTGTTGGCTT GNCTTTCNGA ANACACCAAA 
    AAAAA

AT5G59920.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Curator Summary
Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.
Computational Description
UV-B LIGHT INSENSITIVE 3 (ULI3); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR