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Mutant Lines
12-3028-1

12-3028-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 22759273 [Map]; Strand: c
  - AT1G61660.4 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: -2973; Region: intergenic
  - AT1G61667.1 - [+] show detail - Protein of unknown function, DUF538
    Distance: -8390; Region: intergenic
Flanking Genome Sequence: 12-3028-1 - 5-prime edge
```
CTGTGGGTCC TATTTTTTGA CTACTTGTCG TTTTCCTTCA CCTACTTTAA 
AATTTTATAC ATGTTCATAT TGCTTCTATA CGTATATACG TGTCTATATC 
ACTTTATATA CNGTATACAG GCATACAGCA ATACNGTATT TTGGAGCAAT 
TCTTCGTCAA GTAAGATTGT CAGACAACGA GTGCATGAAT CTCATTGTTC 
GTGATCAAGT TTTACTCCAA CATCCGAAAA GTGTTCGTAT ACTAGCATTG 
TGAAAAAGCG GTATATTTCA AA
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 22759395 [Map]; Strand: c
- AT1G61660.4 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -3095; Region: intergenic
- AT1G61667.1 - [+] show detail - Protein of unknown function, DUF538
  Distance: -8268; Region: intergenic

GCGGCANATN TGAGTGGAGA CTTTGTTTGG CGCNGATNNT CGGNTAANTG 
TCAGCGACTC ATTCTTTTCT TCATNCCCCA NAATCAAATC ATCATATGNC 
CTAACAATTT NTTGTTTNGG ATTTGGAAAA GCACATGTTT CTTTGACTTT 
ATGTTNATGA TANCATNCTN TCTACACGTA AGNNACGTAN TGCTGTTTTT 
GGGACTCACG GGAGCTCATC TGTAATNATN ANGNGGNANG TANTTNACAT 
AAGTNCGAAA ACTAATAAAT AATTAACTNA TCTAANCAGA GTCCTAGTNT 
TACAACAAAT T

AT1G61660.4

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1).
Link: InterPro Scan - TAIR

AT1G61667.1

Model type: Protein coding
Short Description: Protein of unknown function, DUF538
Computational Description: Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G54530.1); Has 441 Blast hits to 441 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR