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12-3033-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22797816 [Map]; Strand: w
      • AT1G61732.1 - [+] show detail - MIR776a; miRNA
        Distance: 2081; Region: intergenic
      • AT1G61740.1 - [+] show detail - Sulfite exporter TauE/SafE family protein
        Distance: 253; Region: intergenic
    Flanking Genome Sequence: 12-3033-1 - 5-prime edge 
    NGGGTGNCGG ACNANNNANN TTTNCTACCC CANGGANACT AGAGTGCTTT 
    CNTAGANTGT GANGTTTATG TGNAATAGAG ATACACGTTA ACCATTAGAC 
    CCACACCGTN GTGCAAGAAC CTTATTGGTA AGAGGTCCCA AAACGGTATC 
    CGTTATTTTG TAGTTGGAGG CCACACCAAC CGCCGCAATG TTCCAATATA 
    TCAAAGGGAT TATAAGTCAT AATGAGATAT ACTAGAACAT TGGCGTGGTT 
    GATGTCACCT CCAGCAACTA CAAGCGTTTT AATCCAAGAA CTTCTTTGTT 
    TTTGAATAAC TCAAAGCAAT TCTATAGTTC AAATTAATCT CTTTCTGAAG 
    AAAATGTAGT TGCCAACGAC GGCGGCAATT GTGGACAGCA TTATGACAAT 
    AAAACTACAC AAACAAATGC ATAGAATTTG ATATTGAAAT CTGAATTTAG 
    GTTCACAACA TAACTTTTAT TTGACCATAT ATTCGAATGC ACGAGATGNN 
    GCATTCTGAA TAGTGATATA AAAATCNTNC CCNNGAAANA AATAGAAAGN 
    TTNCANCCCG GGNGGGGGAC ACGANNGGCC NNTAANGNNN NNNNGGANGN 
    NNNNNNNCCN GNNNNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22797494 [Map]; Strand: w
      • AT1G61732.1 - [+] show detail - MIR776a; miRNA
        Distance: 1759; Region: intergenic
      • AT1G61740.1 - [+] show detail - Sulfite exporter TauE/SafE family protein
        Distance: 575; Region: intergenic
    Flanking Genome Sequence: 12-3033-1 - 3-prime edge 
    GACACCATGA TCTCAAGACC GTTTCTCTGA TCCCAACCAA GACTCTACGT 
    CTCTAACACA AGAATT

AT1G61732.1

Model type
miRNA
Short Description
MIR776a; miRNA
Curator Summary
Encodes a microRNA of unknown function. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UCUAAGUCUUCUAUUGAUGUU
Link
InterPro Scan - TAIR

AT1G61740.1

Model type
Protein coding
Short Description
Sulfite exporter TauE/SafE family protein
Computational Description
Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT1G11540.1); Has 2571 Blast hits to 2364 proteins in 652 species: Archae - 89; Bacteria - 1424; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 853 (source: NCBI BLink).
Link
InterPro Scan - TAIR