1. Home
  2. Mutant Lines
  3. 12-3072-1

12-3072-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8949402 [Map]; Strand: w
      • AT1G25480.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-3072-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AAACAGATAC CAGCACCAAC CAGGATAAGC AAAAACCTAT AATAAGCAGT 
    GCTAAAAAAA TCTCTAGAGT TGTTTCCAGA CACAAGAACA ATACAGTATG 
    TCAACAAAAA CACCCTGAAT GCATATTCAT ACGACTTCAT CGCCGGGTAT 
    AGTTTCAAAT AACTTGCAGA AAAACCTGAT AGACAAACCA ACAGATTCAC 
    AAGTATCAAA AATAAAGTTA GTATGTTTAT TTAAAAAAGG TTCATTTCTA 
    ATAAAAATTG AGAGAAATAG TGCAACCTGC AATGAAAATA CTGATAATGA 
    TAATGAGTTC TTCAAATTCT CCAGCTGAAA CAGAGAGTCT AGCTATGCCA 
    AGAGCAAGTC CTCCAGCAGA GAGTGTTCCT ATAGCTCTAT TAAATCCTTT 
    GACCAATGTT GCTCCTTCAA AAAACAGAGT TAGAGCCAAA TTAGATCTCT 
    GAAGACAAGT AATCCTAAGA CAGATCTAAT GAGAATTTAG ATCGAAGAAG 
    ACGAAAGTTT TGATTTTTAA TCAAAATCCG GAAGATTTGA TCGAACAACA 
    ACAACCCCAG AATCGATCTG AATCTATAGA ATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8949443 [Map]; Strand: w
      • AT1G25480.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-3072-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AATGGGTGNG AACATATTTA 
    TACTTCCCAT TTGGGCTGGA GAANACCTCC ATAAACTAGT TGATAANAAT 
    NTCAAAAGTG NGGCCAATTC ACTTGAAGGT ATGAGAGATA CGTCAAATGG 
    CTGTTTTCTC TTGTTTCGTT TCGGGTTTTG GCTGTTTTTT TATGTCTTGT 
    TTTGTTTGTG CTTTCCTAAA ACTTTCAGGA TGTGTTAATG GGTACTTGCA 
    ATGTGTTGAA TACGAGAGGA TTCCTTCGAA GATTCTCACT TACCAAGCT

AT1G25480.1

Model type
Protein coding
Short Description
Aluminium activated malate transporter family protein
Computational Description
Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G68600.1); Has 866 Blast hits to 864 proteins in 262 species: Archae - 0; Bacteria - 474; Metazoa - 0; Fungi - 26; Plants - 341; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR