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12-3113-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23216888 [Map]; Strand: c
      • AT3G62750.1 - [+] show detail - beta glucosidase 8
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: 12-3113-1 - 5-prime edge 
    GTTGTAGCTA GAAACAGNNC ANNCATCAGT AAATAGTGNC TGATGAAAAA 
    TCAAAATCTN NCCAANGAGG ANNACCCNCN NNGGCCGTTC NGCANCNTAG 
    NNATATTNTG AGAAGCAACA TCAATTGTAC CATTGAGAAA ACCTGAGTAC 
    CAAGAAGCAG AGAGCTTTGA CGACCTCTTG CGAGCAGGAT CGCTGAAATT 
    GACATGGTAC ATTCCGAAGC TGCTTTTATA TCCACCTATT ATCTCATACA 
    AATCTATCAG CGACCATACG AAGTAACCTC TCGTGTCCGA TCCATTCCTG 
    ATCAGTCAGA AACAGAGAGT CAAGTAAACC AGATTTAAAG NGGGACATCA 
    GAAACAATCA ATGCTGAGTA ACGAAAAGAT GAAGAAGGAG GATCATACTT 
    GATGGCGTTG AGCACAGCAC CAATGTTNGC TNCCAGNCCG GGNCGNNNAN 
    NCCNNNGNCN NNNGNNNNGN NNGNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23217021 [Map]; Strand: c
      • AT3G62750.1 - [+] show detail - beta glucosidase 8
        Distance: 0; Region: exon13 (3UTR)
    Flanking Genome Sequence: 12-3113-1 - 3-prime edge 
    ATAAAGACCT CAGGGATTTG CATATGAATA AATGATGTGT CTTGTGAGAT 
    CAATATGAGT CGCATGGATT CTGGATGATT AGTAAAACTA AAAGAATAAC 
    AGTACTCATA CACAATCACA AAAGTCACAG ACAGAGACAG ACACACAAGA 
    CATTTAGCAA TTACGCAGGA ACTCCTCTGT TTCTTCTTGT GATCTACTTG 
    TAAATATTTG AGTCCCAGTT TGGTTTGAGT TTAGTTATGG AATTTTTATC 
    TTCTCGATTT GGATATTAAA AAGCAAATTA TAGTTTAGTA TAGCTTTATC 
    ATCAAATGTA TTCTGTAAAA ATGTAAACGC AAACCTCACT TTTCGCGATT 
    ACATTTACAA AGAAAATTTG ATTAAAATAC TAAGTAGTTT GATGTAACAG 
    CAAACGCAAA AATAACACCC AAAGAACGAA ACAAAAAGAC GTGAGAATCT 
    TTGTATCAAT TTGTGGTGGG AGCAACAGTC AAGCCAGGAG AGACTTTAAG 
    GAAAGCCGGA CGAGAACAGA GATC

AT3G62750.1

Model type
Protein coding
Short Description
beta glucosidase 8
Computational Description
beta glucosidase 8 (BGLU8); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 7 (TAIR:AT3G62740.1); Has 11295 Blast hits to 10975 proteins in 1475 species: Archae - 142; Bacteria - 7812; Metazoa - 710; Fungi - 200; Plants - 1441; Viruses - 0; Other Eukaryotes - 990 (source: NCBI BLink).
Link
InterPro Scan - TAIR