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12-3141-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23224125 [Map]; Strand: c
      • AT1G62710.1 - [+] show detail - beta vacuolar processing enzyme
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: 12-3141-1 - 5-prime edge 
    GGGAAAAACT NACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC GGTTATAGTG AGGCTCGCTA CACGGTGCAT 
    CCATCAATCT TAGGCTATAG CGCCTGAGAG ATTTTGAGGC TTTTCTGATT 
    TTCAAGTGTT TCGAATTATA ACGTTAAAGA TGTCAAAATA AAAGAAATGT 
    TTAGTATGTA AATACGTACG TAGCAATAAG GTCGTCTAAC TTTTTTTTAT 
    CGATTGTTAT CTTTTTAATA AAACTTTGTT AAATATTGTT GTTACCATTT 
    ACATCTAAAA TCTTTAGTGA TCAGCTAAGT GTGTCAGCAT CAGAATTATT 
    AGTGCTACAA TCTCGCTCTC AATTTCGCAG TTATGTTTTC TGTAAAATGT 
    ATTGATACGA ACCATTTGTA AAAAATTTAT TTCTTAAGAG TACATAAATC 
    TACAGATTAT CAGACTATCA CTATTGTCTT TAAGTAGCAG ATAATGATGG 
    TTCCAAATTC TACAAATACC CTAAATTTAT CGTTCGTTTC TTTTCTTTTT 
    TGTCTTATAA TTACTGCCAT CATTGATATC ATTGATCCGA AGAAGACATA 
    CAAACCAATG CAATCATTAT TCCATTCCTA ACATCCATTT TCACTTCAAG 
    TAGAAATATA TTGTAGTTAA ATGAAGATTT TAAAAAAATA CCTGAATGTG 
    TAATTATGTG TTATCACGCC TTGAGCTGCC CAACAGNGAA TCATGAAGGT 
    TGGGGGTGTA TATGTTTTNC TTTGTGCN

AT1G62710.1

Model type
Protein coding
Short Description
beta vacuolar processing enzyme
Curator Summary
Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.
Computational Description
beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Link
InterPro Scan - TAIR