1. Home
  2. Mutant Lines
  3. 12-3156-1

12-3156-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2563737 [Map]; Strand: c
      • AT1G08170.1 - [+] show detail - Histone superfamily protein
        Distance: -65; Region: promoter
    Flanking Genome Sequence: 12-3156-1 - 3-prime edge 
    ATTNAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTAGGGA 
    TGGGTCGTAA CAGTACTTCT GCAATTGACA TGTGGTGCCA CGTGTCGTTT 
    GAATACCTTA GCATTGGTGA TTAACTGTCT ACTACGCGGT GGTTATAAAA 
    ACTAAAAAGT AAGAAAAACT TATCCGGTGA TTCGTATCTG TTTTAAATAA 
    CTAGCCCAAA GCCCGGTGGG CATATAAATG GGCTTAAATG ACTAGATCTA 
    AACGGGTCTC AAAAGCCCAA TACAACATCC TTAACCGTAC TTAATTTTAC 
    ACAGTATATA ATTTTTGTTT TCCCTTATAT ATTTTTAATG AAATTATATG 
    TGACCAAACG ACACCACGAT CACCCTTTCA CCAGCACCAG TTTAGAAAAG 
    AATTTCGTTC CCATAAACAA TGTAATTAGG TTTCATTCCA TTTCATTACA 
    AATTTGAAAC ATGTTTGGAC TGGCCGCTAA TTATCTGATC GCTAAAAAAC 
    TTTTTTTTTC TAGTTCTTAT TGTATTTTTC TTTCTATTTC ATGGTTTTGT 
    GGTANCAGAA AAAAAAANGG ATNTCAAATT TAAAAAACGT NGGGACTTAG 
    GAAAAAGTAN TTNGGGNCAA NTNNTTTTTT TCNTACCNCA NATTTCATTN 
    TGAANCTAAT CTTTAATTAA TAAATNAGGC NATGTCCNAT GGNNTNAANN 
    TCCAANGCCA ATTTTTTTAC TAACAAAAAA AATNCNNNCC AACCCNANNN 
    ANTAATNTTT TTNNCCCTAC CNCCTAAANA NNNANGGGTT TTNTATTC

AT1G08170.1

Model type
Protein coding
Short Description
Histone superfamily protein
Computational Description
Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink).
Link
InterPro Scan - TAIR