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12-3211-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 192741 [Map]; Strand: w
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: -5114; Region: intergenic
      • AT4G00440.1 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: -1138; Region: intergenic
    Flanking Genome Sequence: 12-3211-1 - 3-prime edge 
    CTCAGTTACT TGAGTTGAGT TTTCTTTAAG CAACTTAATT CAGTCAGGGC 
    CGGGACCATA GTTATACATT TACATACACA AAACACACAT AGTTACCACT 
    TATCTATCAA TAGCACGCGT ACAAACGTAT ACACNTATTT TATAGTATAA 
    ATTAAGATTC AGAAATTGAT ACAAACGTGT CATTGTTTTT TGAGGTTGGC 
    ACGTATCGAC CGACAAATAG ATATTGACGA CATGAACTTG CTCCCACTGA 
    GGAATTGTTT TTTTTTTTTT TNGGGGNNNA NCCCCNGGGG NNNNTTNGGN 
    NCCNNGGGNN NATTTTTNCC TTNAAAAAGG GGNTTTTTNA NCCTTTGNAC 
    CNGTTNNNTT TNNNAATTTT NTTTTTTTNN NANTTTTNGG GGNNCCCNGG 
    GGGGNTTTNA AANNGGGNAA AATTNNNGGN NNNNNNAAAA AANNNTTTTT 
    NGGTNCNTTT TNNANNGGCC CCNCNTTTNN NCCNGGNTAA ANCNNNNNAA 
    TTTTTTNGGG NTNNNAAANG TTTNGGAAAA ANTTTTNGGN AANNAAAAAN 
    TTTNGGGNNG NGGGAAANNG GGGTTTTTTA AAAANAAANC NANGGNNNGA 
    AANTTTTTTT GGGGGGGGNT TTTNAAAAAA ANCCNAATTT TTNAAACCNA 
    AAAGGGGTAA AAAANTAAAN TTTNGNGGGG AACCCTTGAA AANTTTTTTT 
    TATNAAAAAN NTTTGNNCTT TNGNAGGGGG GGGGAAANNA NNNGNNNGGG 
    ANACNNNGNC CCCCNNCCCC C

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1239 Blast hits to 1045 proteins in 162 species: Archae - 0; Bacteria - 74; Metazoa - 262; Fungi - 79; Plants - 239; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink).
Link
InterPro Scan - TAIR