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12-3220-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9027141 [Map]; Strand: c
      • AT2G21040.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon5 (CDS)
      • AT2G21045.1 - [+] show detail - Rhodanese/Cell cycle control phosphatase superfamily protein
        Distance: -711; Region: promoter
    Flanking Genome Sequence: 12-3220-1 - 5-prime edge
    ANTACACANC GACNCCNGAC GAACGGGGCT CCNTGACGAA CCGGNTANTT 
    GACGAACCGG NCTCCCNGAC AAACCAGNTN CCTGACGAAC CGCCTCCTGA
    CGAACCAGCT TTCNTGACAG AACCGCCTCC TGACNGAACC AGCTCCCTGA
    CGAACCAGCT CCCTGACNAA CCAGCTTCCT AACGAACCGA CTCCTTGACG
    AACCGCCTCC TGACAAACCA AGCTACCANC CCGGGCCAGN TAANCAATGN
    GTGNACAATA NNGTNNCANA NANNNNNAAN NACACNNTCC CNGANGANAA
    GGNGNNAAAT GATNATTNNN CTTGGTGCNN GCNNCACNAC NNAACGNCCG
    ANCNAGACAN TCCCCCNANA CCCAACANAN CNCACCCNCG CCNCGCNCAC
    CCCGGNNCGC GCCGNNNNCC CNCCAGGNNA CNCNANCCNN ANGCGNTNCN
    AGGNNAGAGA NCGAGNCGTG CNNGTTTTAN CTNATTNNAN AANATAGTTG
    GGGGGGAGAN GNNAGNGAGA GCNGGNGTGA GNGCACTNGT NNNAGTNGNG
    GNGNGNAGGC NAGNNNGNGA NTNNGAGGNG NGGAAGNNGG AGNGAGANGG
    GGNGGGGGGN GGGNGAGGGG GNAAGNGNAG ATAGAAAGGN ANANNAGANN
    NAGAATANGG AAGNNAAANT AGGGNNTNCG CGGNGCGNAG NGNGGAGNGG
    CGAGNGGGGG ANGGAGNNGG NAGNTACGGA GNANGG

AT2G21040.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Curator Summary
C2 domain-containing protein. Possible pseudogene of AT2G20990.
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G21010.1); Has 307 Blast hits to 306 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 166; Fungi - 6; Plants - 131; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G21045.1

Model type
Protein coding
Short Description
Rhodanese/Cell cycle control phosphatase superfamily protein
Computational Description
Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: sulfurtransferase 18 (TAIR:AT5G66170.3); Has 3150 Blast hits to 3144 proteins in 1047 species: Archae - 52; Bacteria - 2382; Metazoa - 28; Fungi - 31; Plants - 181; Viruses - 0; Other Eukaryotes - 476 (source: NCBI BLink).
Link
InterPro Scan - TAIR